Gene: AT4G25100
Gene description
TAIR ID: AT4G25100
Short description: Fe superoxide dismutase 1
Pathogen responsiveness: 0.54
General responsiveness: 0.09
GO biological process
response to cadmium ion, response to ozone, response to copper ion, oxidation-reduction process, response to oxidative stress, removal of superoxide radicals, response to light intensity, circadian rhythm
GO cellular component
plasma membrane, chloroplast membrane, chloroplast envelope, chloroplast, chloroplast stroma, mitochondrion, thylakoid, cytoplasm
GO molecular function
superoxide dismutase activity, protein binding, metal ion binding
Protein domain
| Pfam | PF00081, Iron/manganese superoxide dismutases, alpha-hairpin domain |
| Pfam | PF02777, Iron/manganese superoxide dismutases, C-terminal domain |
Protein-protein interaction network
The number of partners (degree) is: 10 (Top20%)
click to view PPI networkCoexpression network
Differentially expressed condition 
15 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE13739 | Col, WT, control 0 h | Col, WT, G.orontii 5 d | -2.25 | 2.79E-03 |
| GSE13739 | Col, WT, control 0 h | Col, WT, G.orontii 6 h | -1.84 | 1.54E-02 |
| GSE13739 | Col, eds, control 0 h | Col, eds, G.orontii 6 h | -1.58 | 4.38E-02 |
| GSE17464 | Laer, control | Laer, Alternaria brassicicola 3 d | 6.27 | 3.83E-10 |
| GSE17464 | Laer, control | Laer, PstDC3000 12 h | 4.98 | 2.77E-07 |
| GSE17464 | Penta, control | Penta, Alternaria brassicicola 3 d | 7.04 | 8.43E-12 |
| GSE17464 | Penta, control | Penta, PstDC3000 12 h | 4.98 | 2.02E-07 |
| GSE37269 | Ei2, WT, control | Ei2, WT, TEV 21 d | -1.59 | 9.85E-03 |
| GSE37269 | St0, WT, control | St0, WT, TEV 21 d | -1.50 | 9.49E-03 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -2.09 | 2.37E-04 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | -2.69 | 2.41E-05 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | -1.66 | 2.09E-03 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | -2.72 | 4.44E-12 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | -2.02 | 1.25E-02 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | -1.73 | 2.40E-03 |
Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.