Gene: AT4G24690
     

Gene description


TAIR ID: AT4G24690

Short description: ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein

Pathogen responsiveness: -1.25

General responsiveness: -1.58

GO biological process


protein polymerization, macroautophagy, protein transport


GO cellular component


cytoplasm, vacuole


GO molecular function


zinc ion binding, protein binding


Protein domain


PfamPF00569, Zinc finger, ZZ type
PfamPF00564, PB1 domain
PfamPF16158, Ig-like domain from next to BRCA1 gene
SMARTSM00291, ZnF_ZZ
SMARTSM00666, PB1

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G07100, AT5G22570, AT2G46130

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 15 (Top20%)

click to view PPI network

Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.923.75E-08
GSE20278Col, RPL18-HF, controlCol, RPL18-HF, TuMV 10 d1.701.09E-03
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.578.73E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.812.24E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.211.35E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.231.03E-11






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