gene detail

Gene description

TAIR ID: AT4G24120

Short description: YELLOW STRIPE like 1

Pathogen responsiveness: -1.02

General responsiveness: 0.69

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

oligopeptide transport, seed development, transmembrane transport, iron ion homeostasis, ion transport, developmental process involved in reproduction, response to iron ion

GO cellular component

plasma membrane, integral component of membrane

GO molecular function

oligopeptide transporter activity, iron-nicotianamine transmembrane transporter activity

Protein domain

Pfam	PF03169, OPT oligopeptide transporter protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G56110, AT1G73805, AT5G26920, AT1G24260

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-1.68	6.34E-07
GSE17464	Penta, control	Penta, Flg22 2 h	-1.50	1.08E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.82	1.14E-08
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	1.65	2.32E-02
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	2.94	2.85E-05