gene detail

Gene description

TAIR ID: AT4G22540

Short description: OSBP(oxysterol binding protein)-related protein 2A

Pathogen responsiveness: -0.96

General responsiveness: -0.96

Orthologous

Rice:

OS08G0154900

Maize:

GRMZM2G402653

Wheat: No orthologous gene

GO biological process

steroid metabolic process, lipid transport, signal transduction

GO cellular component

nucleus

GO molecular function

lipid binding

Protein domain

Pfam	PF15413, Pleckstrin homology domain
Pfam	PF01237, Oxysterol-binding protein
SMART	SM00233, PH

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT4G16110, AT3G27920, AT5G61850, AT3G20770

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.50	1.07E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.70	1.82E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.81	5.10E-14
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.79	1.15E-04
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.72	1.04E-03
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 90-105 min	-2.19	1.07E-02