Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G22540

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA0.00E+00
2GO:0045176: apical protein localization0.00E+00
3GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity7.27E-05
4GO:0019478: D-amino acid catabolic process1.67E-04
5GO:0010729: positive regulation of hydrogen peroxide biosynthetic process1.67E-04
6GO:0080175: phragmoplast microtubule organization3.78E-04
7GO:0080005: photosystem stoichiometry adjustment3.78E-04
8GO:0009800: cinnamic acid biosynthetic process8.83E-04
9GO:0015846: polyamine transport1.17E-03
10GO:0010158: abaxial cell fate specification1.48E-03
11GO:0031365: N-terminal protein amino acid modification1.48E-03
12GO:0051225: spindle assembly1.48E-03
13GO:0002229: defense response to oomycetes1.52E-03
14GO:0006559: L-phenylalanine catabolic process1.83E-03
15GO:0048827: phyllome development1.83E-03
16GO:0009942: longitudinal axis specification2.19E-03
17GO:0010050: vegetative phase change2.58E-03
18GO:0006401: RNA catabolic process2.58E-03
19GO:0009610: response to symbiotic fungus2.58E-03
20GO:0006353: DNA-templated transcription, termination2.99E-03
21GO:0009850: auxin metabolic process2.99E-03
22GO:0009657: plastid organization3.41E-03
23GO:0010052: guard cell differentiation3.41E-03
24GO:0007389: pattern specification process3.41E-03
25GO:0000373: Group II intron splicing3.86E-03
26GO:0009658: chloroplast organization4.41E-03
27GO:0019538: protein metabolic process4.81E-03
28GO:0006415: translational termination5.32E-03
29GO:0016485: protein processing5.32E-03
30GO:0010582: floral meristem determinacy5.84E-03
31GO:0010229: inflorescence development6.38E-03
32GO:0010020: chloroplast fission6.93E-03
33GO:0010540: basipetal auxin transport6.93E-03
34GO:0080188: RNA-directed DNA methylation7.50E-03
35GO:0006863: purine nucleobase transport8.10E-03
36GO:0051726: regulation of cell cycle9.37E-03
37GO:0006306: DNA methylation9.97E-03
38GO:0016226: iron-sulfur cluster assembly1.06E-02
39GO:0048653: anther development1.34E-02
40GO:0048868: pollen tube development1.41E-02
41GO:0048825: cotyledon development1.56E-02
42GO:0009451: RNA modification1.57E-02
43GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.64E-02
44GO:0010583: response to cyclopentenone1.72E-02
45GO:0031047: gene silencing by RNA1.72E-02
46GO:0010252: auxin homeostasis1.88E-02
47GO:0009911: positive regulation of flower development2.13E-02
48GO:0051301: cell division2.19E-02
49GO:0007049: cell cycle2.65E-02
50GO:0000160: phosphorelay signal transduction system2.67E-02
51GO:0007568: aging2.85E-02
52GO:0080167: response to karrikin2.95E-02
53GO:0046777: protein autophosphorylation3.15E-02
54GO:0009926: auxin polar transport3.65E-02
55GO:0051707: response to other organism3.65E-02
56GO:0006629: lipid metabolic process4.34E-02
57GO:0006364: rRNA processing4.51E-02
58GO:0009736: cytokinin-activated signaling pathway4.51E-02
59GO:0051603: proteolysis involved in cellular protein catabolic process4.62E-02
60GO:0008152: metabolic process4.77E-02
61GO:0006468: protein phosphorylation4.96E-02
RankGO TermAdjusted P value
1GO:0008859: exoribonuclease II activity0.00E+00
2GO:0019808: polyamine binding0.00E+00
3GO:0080062: cytokinin 9-beta-glucosyltransferase activity1.67E-04
4GO:0047807: cytokinin 7-beta-glucosyltransferase activity1.67E-04
5GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity3.78E-04
6GO:0008805: carbon-monoxide oxygenase activity3.78E-04
7GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity3.78E-04
8GO:0004047: aminomethyltransferase activity3.78E-04
9GO:0045548: phenylalanine ammonia-lyase activity6.19E-04
10GO:0019901: protein kinase binding1.42E-03
11GO:0005471: ATP:ADP antiporter activity1.48E-03
12GO:0019899: enzyme binding2.58E-03
13GO:0008235: metalloexopeptidase activity2.58E-03
14GO:0004693: cyclin-dependent protein serine/threonine kinase activity3.12E-03
15GO:0003747: translation release factor activity3.86E-03
16GO:0009672: auxin:proton symporter activity4.33E-03
17GO:0004713: protein tyrosine kinase activity4.81E-03
18GO:0015020: glucuronosyltransferase activity4.81E-03
19GO:0043621: protein self-association4.99E-03
20GO:0008327: methyl-CpG binding5.32E-03
21GO:0004177: aminopeptidase activity5.32E-03
22GO:0000175: 3'-5'-exoribonuclease activity6.38E-03
23GO:0010329: auxin efflux transmembrane transporter activity6.38E-03
24GO:0009982: pseudouridine synthase activity6.38E-03
25GO:0042973: glucan endo-1,3-beta-D-glucosidase activity6.93E-03
26GO:0080043: quercetin 3-O-glucosyltransferase activity8.07E-03
27GO:0080044: quercetin 7-O-glucosyltransferase activity8.07E-03
28GO:0043424: protein histidine kinase binding9.33E-03
29GO:0005345: purine nucleobase transmembrane transporter activity9.33E-03
30GO:0004540: ribonuclease activity9.97E-03
31GO:0008194: UDP-glycosyltransferase activity1.72E-02
32GO:0000156: phosphorelay response regulator activity1.80E-02
33GO:0008237: metallopeptidase activity1.96E-02
34GO:0016301: kinase activity2.11E-02
35GO:0046982: protein heterodimerization activity2.33E-02
36GO:0004806: triglyceride lipase activity2.39E-02
37GO:0004672: protein kinase activity2.42E-02
38GO:0004222: metalloendopeptidase activity2.76E-02
39GO:0004712: protein serine/threonine/tyrosine kinase activity3.24E-02
40GO:0004185: serine-type carboxypeptidase activity3.65E-02
41GO:0004871: signal transducer activity3.69E-02
42GO:0042803: protein homodimerization activity3.69E-02
43GO:0051537: 2 iron, 2 sulfur cluster binding3.86E-02
44GO:0003924: GTPase activity4.34E-02
45GO:0016298: lipase activity4.62E-02
46GO:0003777: microtubule motor activity4.84E-02
RankGO TermAdjusted P value
1GO:0042597: periplasmic space0.00E+00
2GO:0035452: extrinsic component of plastid membrane0.00E+00
3GO:0010370: perinucleolar chromocenter1.67E-04
4GO:0070652: HAUS complex6.19E-04
5GO:0000178: exosome (RNase complex)1.48E-03
6GO:0005720: nuclear heterochromatin3.86E-03
7GO:0005819: spindle3.91E-03
8GO:0009507: chloroplast5.56E-03
9GO:0016602: CCAAT-binding factor complex6.38E-03
10GO:0000419: DNA-directed RNA polymerase V complex8.10E-03
11GO:0009532: plastid stroma9.97E-03
12GO:0005770: late endosome1.41E-02
13GO:0046658: anchored component of plasma membrane2.03E-02
14GO:0000932: P-body2.13E-02
15GO:0009707: chloroplast outer membrane2.57E-02
16GO:0005874: microtubule2.85E-02
17GO:0031225: anchored component of membrane3.43E-02
18GO:0043231: intracellular membrane-bounded organelle4.77E-02
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Gene type



Gene DE type