Gene: AT4G20440
     


Gene description


TAIR ID: AT4G20440

Short description: small nuclear ribonucleoprotein associated protein B

Pathogen responsiveness: -3.05

General responsiveness: -2.47

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G022041  

Wheat: No orthologous gene

GO biological process


mRNA splicing, via spliceosome


GO cellular component


nucleoplasm, U1 snRNP, nucleus, U5 snRNP, U2-type prespliceosome, U2 snRNP, Cajal body, cytosol, U4 snRNP, catalytic step 2 spliceosome, viral nucleocapsid, U4/U6 x U5 tri-snRNP complex, small nucleolar ribonucleoprotein complex


GO molecular function


RNA binding


Protein domain


PfamPF01423, LSM domain
SMARTSM00651, Sm

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


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