Gene: AT4G20140
     

Gene description


TAIR ID: AT4G20140

Short description: Leucine-rich repeat transmembrane protein kinase

Pathogen responsiveness: -0.93

General responsiveness: 0.56

Orthologous


Rice:

OS07G0498400   OS10G0468500  

Maize:

GRMZM2G313643  

Wheat: No orthologous gene

GO biological process


regulation of root morphogenesis, regulation of cell division, regulation of root development, protein phosphorylation, water homeostasis, endodermal cell differentiation, plant epidermis development, cell wall organization, transmembrane receptor protein tyrosine kinase signaling pathway, potassium ion homeostasis, regulation of endodermal cell differentiation, water transport, embryo development, regulation of cell fate specification, specification of plant organ axis polarity, establishment of protein localization, response to wounding


GO cellular component


Casparian strip, plasma membrane, integral component of membrane


GO molecular function


ATP binding, protein binding, protein serine/threonine kinase activity


Protein domain


PfamPF08263, Leucine rich repeat N-terminal domain
PfamPF13855, Leucine rich repeat
PfamPF00560, Leucine Rich Repeat
PfamPF00069, Protein kinase domain
SMARTSM00369, LRR_TYP
SMARTSM00365, LRR_SD22
SMARTSM00220, S_TKc

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G24050, AT4G34680, AT2G45050, AT3G60530, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 12 (Top20%)

click to view PPI network

Differentially expressed condition


9 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.872.23E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-3.881.62E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.101.52E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.927.44E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.761.75E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.521.62E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.838.39E-14
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.715.03E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.544.58E-13






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