gene detail

Gene description

TAIR ID: AT4G18350

Short description: nine-cis-epoxycarotenoid dioxygenase 2

Pathogen responsiveness: -1.45

General responsiveness: -2.42

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

abscisic acid biosynthetic process, oxidation-reduction process

GO cellular component

chloroplast thylakoid membrane, chloroplast stroma, chloroplast

GO molecular function

9-cis-epoxycarotenoid dioxygenase activity, metal ion binding

Protein domain

Pfam	PF03055, Retinal pigment epithelial membrane protein

Metabolic pathway

PWY-695: abscisic acid biosynthesis

KEGG pathway

PATH:ath00906: Carotenoid biosynthesis

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

No coexpression gene

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.43	2.65E-02
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	5.43	2.56E-09