Gene: AT4G18130
     


Gene description


TAIR ID: AT4G18130

Short description: phytochrome E

Pathogen responsiveness: -2.10

General responsiveness: -1.39

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, red, far-red light phototransduction, protein-tetrapyrrole linkage, protein-chromophore linkage, detection of visible light, transcription


GO cellular component


unkown


GO molecular function


protein binding, protein histidine kinase activity, phosphorelay sensor kinase activity, signal transducer activity, protein homodimerization activity, G-protein coupled photoreceptor activity, photoreceptor activity


Protein domain


PfamPF08446, PAS fold
PfamPF00360, Phytochrome region
PfamPF00512, His Kinase A (phospho-acceptor) domain
PfamPF01590, GAF domain
PfamPF02518, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PfamPF00989, PAS fold
SMARTSM00387, HATPase_c
SMARTSM00388, HisKA
SMARTSM00065, GAF
SMARTSM00091, PAS

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 8

click to view PPI network

Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.751.13E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.893.72E-03






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