Gene: AT4G17600
     


Gene description


TAIR ID: AT4G17600

Short description: Chlorophyll A-B binding family protein

Pathogen responsiveness: 0.66

General responsiveness: 3.01

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G027640  

Wheat: No orthologous gene

GO biological process


photosynthesis, positive regulation of phytol biosynthetic process, positive regulation of vitamin E biosynthetic process, protein-chromophore linkage, regulation of transcription, DNA-templated, positive regulation of chlorophyll biosynthetic process, transmembrane transport


GO cellular component


chloroplast, chloroplast thylakoid membrane, thylakoid membrane, integral component of membrane, photosystem II


GO molecular function


substrate-specific transmembrane transporter activity, protein binding, transcription factor activity, sequence-specific DNA binding, identical protein binding


Protein domain


PfamPF00504, Chlorophyll A-B binding protein

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G13450

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


32 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-1.793.54E-04
GSE17464Laer, controlLaer, Flg22 2 h-1.759.15E-05
GSE17464Penta, controlPenta, Flg22 2 h-1.553.73E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-2.221.35E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.314.39E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.337.99E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.662.52E-11
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-1.961.69E-05
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.801.79E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-3.671.26E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.416.72E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-3.161.14E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.349.72E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.334.43E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.314.13E-10
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.914.26E-06
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-1.511.18E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.792.98E-07
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-3.138.56E-14
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.791.75E-05
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.262.13E-08
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.204.22E-08
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.281.18E-08
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.503.75E-04
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-2.026.13E-07
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.752.57E-05
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-2.026.65E-07
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h-1.665.40E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.201.49E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.931.96E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.561.32E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-1.531.69E-03






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