Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G17600

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
2GO:0034337: RNA folding0.00E+00
3GO:0006982: response to lipid hydroperoxide0.00E+00
4GO:0002184: cytoplasmic translational termination0.00E+00
5GO:0010335: response to non-ionic osmotic stress0.00E+00
6GO:1901918: negative regulation of exoribonuclease activity0.00E+00
7GO:0016553: base conversion or substitution editing0.00E+00
8GO:0090279: regulation of calcium ion import0.00E+00
9GO:0090470: shoot organ boundary specification0.00E+00
10GO:0015717: triose phosphate transport0.00E+00
11GO:0005996: monosaccharide metabolic process0.00E+00
12GO:0071474: cellular hyperosmotic response0.00E+00
13GO:0015995: chlorophyll biosynthetic process6.04E-13
14GO:0015979: photosynthesis2.63E-08
15GO:0055114: oxidation-reduction process5.44E-08
16GO:0019252: starch biosynthetic process1.14E-07
17GO:0010207: photosystem II assembly1.25E-07
18GO:0010021: amylopectin biosynthetic process1.09E-06
19GO:0048564: photosystem I assembly1.89E-05
20GO:0071482: cellular response to light stimulus2.69E-05
21GO:2001141: regulation of RNA biosynthetic process6.06E-05
22GO:0009658: chloroplast organization6.08E-05
23GO:0006633: fatty acid biosynthetic process1.03E-04
24GO:0006094: gluconeogenesis1.19E-04
25GO:0010027: thylakoid membrane organization1.48E-04
26GO:0009735: response to cytokinin2.40E-04
27GO:0071461: cellular response to redox state4.26E-04
28GO:0051775: response to redox state4.26E-04
29GO:0071277: cellular response to calcium ion4.26E-04
30GO:1902458: positive regulation of stomatal opening4.26E-04
31GO:0009090: homoserine biosynthetic process4.26E-04
32GO:0015969: guanosine tetraphosphate metabolic process4.26E-04
33GO:1902478: negative regulation of defense response to bacterium, incompatible interaction4.26E-04
34GO:0043489: RNA stabilization4.26E-04
35GO:0000481: maturation of 5S rRNA4.26E-04
36GO:0015801: aromatic amino acid transport4.26E-04
37GO:0043953: protein transport by the Tat complex4.26E-04
38GO:0010426: DNA methylation on cytosine within a CHH sequence4.26E-04
39GO:0065002: intracellular protein transmembrane transport4.26E-04
40GO:0043686: co-translational protein modification4.26E-04
41GO:0043087: regulation of GTPase activity4.26E-04
42GO:0016559: peroxisome fission5.08E-04
43GO:0009704: de-etiolation5.08E-04
44GO:0006412: translation6.09E-04
45GO:0032544: plastid translation6.20E-04
46GO:0044550: secondary metabolite biosynthetic process6.39E-04
47GO:0006783: heme biosynthetic process7.43E-04
48GO:0006729: tetrahydrobiopterin biosynthetic process9.21E-04
49GO:1903426: regulation of reactive oxygen species biosynthetic process9.21E-04
50GO:0030388: fructose 1,6-bisphosphate metabolic process9.21E-04
51GO:0051262: protein tetramerization9.21E-04
52GO:0010275: NAD(P)H dehydrogenase complex assembly9.21E-04
53GO:0080005: photosystem stoichiometry adjustment9.21E-04
54GO:0042819: vitamin B6 biosynthetic process9.21E-04
55GO:0006096: glycolytic process1.06E-03
56GO:0009773: photosynthetic electron transport in photosystem I1.17E-03
57GO:0006352: DNA-templated transcription, initiation1.17E-03
58GO:0018119: peptidyl-cysteine S-nitrosylation1.17E-03
59GO:0016024: CDP-diacylglycerol biosynthetic process1.34E-03
60GO:0005977: glycogen metabolic process1.50E-03
61GO:0034051: negative regulation of plant-type hypersensitive response1.50E-03
62GO:0006000: fructose metabolic process1.50E-03
63GO:0035436: triose phosphate transmembrane transport1.50E-03
64GO:0044375: regulation of peroxisome size1.50E-03
65GO:0005975: carbohydrate metabolic process1.66E-03
66GO:0019253: reductive pentose-phosphate cycle1.72E-03
67GO:0010143: cutin biosynthetic process1.72E-03
68GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.17E-03
69GO:0009067: aspartate family amino acid biosynthetic process2.17E-03
70GO:0010371: regulation of gibberellin biosynthetic process2.17E-03
71GO:0006020: inositol metabolic process2.17E-03
72GO:0009152: purine ribonucleotide biosynthetic process2.17E-03
73GO:0046653: tetrahydrofolate metabolic process2.17E-03
74GO:0006107: oxaloacetate metabolic process2.17E-03
75GO:0009052: pentose-phosphate shunt, non-oxidative branch2.17E-03
76GO:0033014: tetrapyrrole biosynthetic process2.17E-03
77GO:0008615: pyridoxine biosynthetic process2.17E-03
78GO:0010731: protein glutathionylation2.17E-03
79GO:1901332: negative regulation of lateral root development2.17E-03
80GO:0042823: pyridoxal phosphate biosynthetic process2.17E-03
81GO:0006631: fatty acid metabolic process2.82E-03
82GO:0045727: positive regulation of translation2.91E-03
83GO:0015994: chlorophyll metabolic process2.91E-03
84GO:0006536: glutamate metabolic process2.91E-03
85GO:0006546: glycine catabolic process2.91E-03
86GO:0006021: inositol biosynthetic process2.91E-03
87GO:0010600: regulation of auxin biosynthetic process2.91E-03
88GO:0006734: NADH metabolic process2.91E-03
89GO:0015713: phosphoglycerate transport2.91E-03
90GO:0031365: N-terminal protein amino acid modification3.73E-03
91GO:0009107: lipoate biosynthetic process3.73E-03
92GO:0000304: response to singlet oxygen3.73E-03
93GO:0006564: L-serine biosynthetic process3.73E-03
94GO:0010236: plastoquinone biosynthetic process3.73E-03
95GO:0045038: protein import into chloroplast thylakoid membrane3.73E-03
96GO:0042631: cellular response to water deprivation4.40E-03
97GO:0046855: inositol phosphate dephosphorylation4.61E-03
98GO:0010304: PSII associated light-harvesting complex II catabolic process4.61E-03
99GO:0042549: photosystem II stabilization4.61E-03
100GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.61E-03
101GO:0000470: maturation of LSU-rRNA4.61E-03
102GO:0006655: phosphatidylglycerol biosynthetic process4.61E-03
103GO:0009920: cell plate formation involved in plant-type cell wall biogenesis4.61E-03
104GO:0009643: photosynthetic acclimation4.61E-03
105GO:0006014: D-ribose metabolic process4.61E-03
106GO:0006520: cellular amino acid metabolic process4.74E-03
107GO:0009088: threonine biosynthetic process5.57E-03
108GO:0010244: response to low fluence blue light stimulus by blue low-fluence system5.57E-03
109GO:0010189: vitamin E biosynthetic process5.57E-03
110GO:0009854: oxidative photosynthetic carbon pathway5.57E-03
111GO:1901259: chloroplast rRNA processing5.57E-03
112GO:0042254: ribosome biogenesis6.49E-03
113GO:0010161: red light signaling pathway6.58E-03
114GO:0009772: photosynthetic electron transport in photosystem II6.58E-03
115GO:1900057: positive regulation of leaf senescence6.58E-03
116GO:0006400: tRNA modification6.58E-03
117GO:0010928: regulation of auxin mediated signaling pathway7.65E-03
118GO:0005978: glycogen biosynthetic process7.65E-03
119GO:0032508: DNA duplex unwinding7.65E-03
120GO:2000070: regulation of response to water deprivation7.65E-03
121GO:0009932: cell tip growth8.79E-03
122GO:0006002: fructose 6-phosphate metabolic process8.79E-03
123GO:0015996: chlorophyll catabolic process8.79E-03
124GO:0007186: G-protein coupled receptor signaling pathway8.79E-03
125GO:0006526: arginine biosynthetic process8.79E-03
126GO:0009657: plastid organization8.79E-03
127GO:0010206: photosystem II repair9.98E-03
128GO:0090333: regulation of stomatal closure9.98E-03
129GO:0006098: pentose-phosphate shunt9.98E-03
130GO:0006754: ATP biosynthetic process9.98E-03
131GO:0005982: starch metabolic process1.12E-02
132GO:0010205: photoinhibition1.12E-02
133GO:0006779: porphyrin-containing compound biosynthetic process1.12E-02
134GO:0009086: methionine biosynthetic process1.12E-02
135GO:0006810: transport1.16E-02
136GO:0010311: lateral root formation1.17E-02
137GO:0043069: negative regulation of programmed cell death1.25E-02
138GO:0006535: cysteine biosynthetic process from serine1.25E-02
139GO:0006782: protoporphyrinogen IX biosynthetic process1.25E-02
140GO:0019684: photosynthesis, light reaction1.39E-02
141GO:0009089: lysine biosynthetic process via diaminopimelate1.39E-02
142GO:0072593: reactive oxygen species metabolic process1.39E-02
143GO:0000272: polysaccharide catabolic process1.39E-02
144GO:0008285: negative regulation of cell proliferation1.39E-02
145GO:0009853: photorespiration1.41E-02
146GO:0016051: carbohydrate biosynthetic process1.41E-02
147GO:0006790: sulfur compound metabolic process1.53E-02
148GO:0045037: protein import into chloroplast stroma1.53E-02
149GO:0006807: nitrogen compound metabolic process1.67E-02
150GO:0018107: peptidyl-threonine phosphorylation1.67E-02
151GO:0009767: photosynthetic electron transport chain1.67E-02
152GO:0005986: sucrose biosynthetic process1.67E-02
153GO:0006108: malate metabolic process1.67E-02
154GO:0006006: glucose metabolic process1.67E-02
155GO:0009266: response to temperature stimulus1.82E-02
156GO:0034605: cellular response to heat1.82E-02
157GO:0010020: chloroplast fission1.82E-02
158GO:0046854: phosphatidylinositol phosphorylation1.98E-02
159GO:0007031: peroxisome organization1.98E-02
160GO:0042343: indole glucosinolate metabolic process1.98E-02
161GO:0009636: response to toxic substance2.05E-02
162GO:0006833: water transport2.14E-02
163GO:0010025: wax biosynthetic process2.14E-02
164GO:0006636: unsaturated fatty acid biosynthetic process2.14E-02
165GO:0019344: cysteine biosynthetic process2.30E-02
166GO:0000027: ribosomal large subunit assembly2.30E-02
167GO:0006364: rRNA processing2.46E-02
168GO:0010073: meristem maintenance2.47E-02
169GO:0008299: isoprenoid biosynthetic process2.47E-02
170GO:0009768: photosynthesis, light harvesting in photosystem I2.47E-02
171GO:0007017: microtubule-based process2.47E-02
172GO:0048511: rhythmic process2.64E-02
173GO:0098542: defense response to other organism2.64E-02
174GO:0010431: seed maturation2.64E-02
175GO:0061077: chaperone-mediated protein folding2.64E-02
176GO:0031408: oxylipin biosynthetic process2.64E-02
177GO:0006306: DNA methylation2.64E-02
178GO:0003333: amino acid transmembrane transport2.64E-02
179GO:0080092: regulation of pollen tube growth2.82E-02
180GO:0019748: secondary metabolic process2.82E-02
181GO:0016226: iron-sulfur cluster assembly2.82E-02
182GO:0010017: red or far-red light signaling pathway2.82E-02
183GO:0035428: hexose transmembrane transport2.82E-02
184GO:0010227: floral organ abscission3.00E-02
185GO:0009306: protein secretion3.18E-02
186GO:0046686: response to cadmium ion3.34E-02
187GO:0034220: ion transmembrane transport3.56E-02
188GO:0006396: RNA processing3.61E-02
189GO:0010182: sugar mediated signaling pathway3.75E-02
190GO:0046323: glucose import3.75E-02
191GO:0009741: response to brassinosteroid3.75E-02
192GO:0009646: response to absence of light3.95E-02
193GO:0015986: ATP synthesis coupled proton transport3.95E-02
194GO:0009791: post-embryonic development4.15E-02
195GO:0010183: pollen tube guidance4.15E-02
196GO:0000302: response to reactive oxygen species4.36E-02
197GO:0030163: protein catabolic process4.78E-02
198GO:0042744: hydrogen peroxide catabolic process4.97E-02
199GO:0009567: double fertilization forming a zygote and endosperm4.99E-02
RankGO TermAdjusted P value
1GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
2GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
3GO:0036033: mediator complex binding0.00E+00
4GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
5GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
6GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
7GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
8GO:0045550: geranylgeranyl reductase activity0.00E+00
9GO:0050613: delta14-sterol reductase activity0.00E+00
10GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
11GO:0090711: FMN hydrolase activity0.00E+00
12GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
13GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
14GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity0.00E+00
15GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
16GO:0008465: glycerate dehydrogenase activity0.00E+00
17GO:0046408: chlorophyll synthetase activity0.00E+00
18GO:0019843: rRNA binding1.41E-09
19GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor6.06E-05
20GO:0016851: magnesium chelatase activity6.06E-05
21GO:0001053: plastid sigma factor activity1.06E-04
22GO:0009011: starch synthase activity1.06E-04
23GO:0016987: sigma factor activity1.06E-04
24GO:0008266: poly(U) RNA binding1.43E-04
25GO:0003735: structural constituent of ribosome1.46E-04
26GO:0004332: fructose-bisphosphate aldolase activity2.34E-04
27GO:0004366: glycerol-3-phosphate O-acyltransferase activity2.34E-04
28GO:0016491: oxidoreductase activity3.89E-04
29GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity4.26E-04
30GO:0031957: very long-chain fatty acid-CoA ligase activity4.26E-04
31GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity4.26E-04
32GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity4.26E-04
33GO:0005227: calcium activated cation channel activity4.26E-04
34GO:0016776: phosphotransferase activity, phosphate group as acceptor4.26E-04
35GO:0004856: xylulokinase activity4.26E-04
36GO:0080132: fatty acid alpha-hydroxylase activity4.26E-04
37GO:0008746: NAD(P)+ transhydrogenase activity4.26E-04
38GO:0004325: ferrochelatase activity4.26E-04
39GO:0004853: uroporphyrinogen decarboxylase activity4.26E-04
40GO:0042586: peptide deformylase activity4.26E-04
41GO:0003755: peptidyl-prolyl cis-trans isomerase activity6.60E-04
42GO:0042389: omega-3 fatty acid desaturase activity9.21E-04
43GO:0010297: heteropolysaccharide binding9.21E-04
44GO:0009977: proton motive force dependent protein transmembrane transporter activity9.21E-04
45GO:0004617: phosphoglycerate dehydrogenase activity9.21E-04
46GO:0004047: aminomethyltransferase activity9.21E-04
47GO:0052832: inositol monophosphate 3-phosphatase activity9.21E-04
48GO:0033201: alpha-1,4-glucan synthase activity9.21E-04
49GO:0015173: aromatic amino acid transmembrane transporter activity9.21E-04
50GO:0018708: thiol S-methyltransferase activity9.21E-04
51GO:0003844: 1,4-alpha-glucan branching enzyme activity9.21E-04
52GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity9.21E-04
53GO:0016630: protochlorophyllide reductase activity9.21E-04
54GO:0019156: isoamylase activity9.21E-04
55GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity9.21E-04
56GO:0008934: inositol monophosphate 1-phosphatase activity9.21E-04
57GO:0008728: GTP diphosphokinase activity9.21E-04
58GO:0052833: inositol monophosphate 4-phosphatase activity9.21E-04
59GO:0004412: homoserine dehydrogenase activity9.21E-04
60GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity9.21E-04
61GO:0050017: L-3-cyanoalanine synthase activity9.21E-04
62GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity9.21E-04
63GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.50E-03
64GO:0070402: NADPH binding1.50E-03
65GO:0071917: triose-phosphate transmembrane transporter activity1.50E-03
66GO:0008864: formyltetrahydrofolate deformylase activity1.50E-03
67GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.50E-03
68GO:0005504: fatty acid binding1.50E-03
69GO:0043169: cation binding1.50E-03
70GO:0004373: glycogen (starch) synthase activity1.50E-03
71GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.50E-03
72GO:0016992: lipoate synthase activity1.50E-03
73GO:0004751: ribose-5-phosphate isomerase activity1.50E-03
74GO:0030267: glyoxylate reductase (NADP) activity1.50E-03
75GO:0031072: heat shock protein binding1.52E-03
76GO:0004565: beta-galactosidase activity1.52E-03
77GO:0043023: ribosomal large subunit binding2.17E-03
78GO:0004351: glutamate decarboxylase activity2.17E-03
79GO:0004072: aspartate kinase activity2.17E-03
80GO:0005528: FK506 binding2.38E-03
81GO:0003993: acid phosphatase activity2.40E-03
82GO:0004176: ATP-dependent peptidase activity2.89E-03
83GO:0015120: phosphoglycerate transmembrane transporter activity2.91E-03
84GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.91E-03
85GO:0045430: chalcone isomerase activity2.91E-03
86GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.47E-03
87GO:0003959: NADPH dehydrogenase activity3.73E-03
88GO:0005275: amine transmembrane transporter activity3.73E-03
89GO:0016773: phosphotransferase activity, alcohol group as acceptor3.73E-03
90GO:0051287: NAD binding4.00E-03
91GO:0042578: phosphoric ester hydrolase activity4.61E-03
92GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity4.61E-03
93GO:0004556: alpha-amylase activity4.61E-03
94GO:0004130: cytochrome-c peroxidase activity4.61E-03
95GO:0016615: malate dehydrogenase activity4.61E-03
96GO:0005506: iron ion binding4.90E-03
97GO:0004124: cysteine synthase activity5.57E-03
98GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity5.57E-03
99GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity5.57E-03
100GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.57E-03
101GO:0102391: decanoate--CoA ligase activity5.57E-03
102GO:0004747: ribokinase activity5.57E-03
103GO:0030060: L-malate dehydrogenase activity5.57E-03
104GO:0005261: cation channel activity5.57E-03
105GO:0003886: DNA (cytosine-5-)-methyltransferase activity5.57E-03
106GO:0048038: quinone binding5.86E-03
107GO:0004467: long-chain fatty acid-CoA ligase activity6.58E-03
108GO:0008865: fructokinase activity7.65E-03
109GO:0004033: aldo-keto reductase (NADP) activity7.65E-03
110GO:0016597: amino acid binding8.01E-03
111GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water8.79E-03
112GO:0008135: translation factor activity, RNA binding8.79E-03
113GO:0005525: GTP binding9.70E-03
114GO:0071949: FAD binding9.98E-03
115GO:0030955: potassium ion binding1.12E-02
116GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.12E-02
117GO:0004743: pyruvate kinase activity1.12E-02
118GO:0003723: RNA binding1.13E-02
119GO:0004222: metalloendopeptidase activity1.23E-02
120GO:0005509: calcium ion binding1.24E-02
121GO:0030234: enzyme regulator activity1.25E-02
122GO:0020037: heme binding1.35E-02
123GO:0005089: Rho guanyl-nucleotide exchange factor activity1.39E-02
124GO:0003746: translation elongation factor activity1.41E-02
125GO:0004364: glutathione transferase activity1.75E-02
126GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.82E-02
127GO:0042802: identical protein binding1.96E-02
128GO:0043621: protein self-association1.97E-02
129GO:0035091: phosphatidylinositol binding1.97E-02
130GO:0005198: structural molecule activity2.05E-02
131GO:0031409: pigment binding2.14E-02
132GO:0051536: iron-sulfur cluster binding2.30E-02
133GO:0003899: DNA-directed 5'-3' RNA polymerase activity2.46E-02
134GO:0004601: peroxidase activity2.51E-02
135GO:0005515: protein binding2.89E-02
136GO:0016887: ATPase activity3.02E-02
137GO:0003729: mRNA binding3.07E-02
138GO:0003727: single-stranded RNA binding3.18E-02
139GO:0051082: unfolded protein binding3.50E-02
140GO:0008080: N-acetyltransferase activity3.75E-02
141GO:0046933: proton-transporting ATP synthase activity, rotational mechanism3.75E-02
142GO:0016853: isomerase activity3.95E-02
143GO:0005355: glucose transmembrane transporter activity3.95E-02
144GO:0050662: coenzyme binding3.95E-02
145GO:0030170: pyridoxal phosphate binding4.85E-02
146GO:0016791: phosphatase activity4.99E-02
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Gene type



Gene DE type