gene detail

Gene description

TAIR ID: AT4G17090

Short description: chloroplast beta-amylase

Pathogen responsiveness: -0.70

General responsiveness: 2.87

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

starch catabolic process, maltose biosynthetic process, response to cold

GO cellular component

chloroplast, chloroplast stroma

GO molecular function

beta-amylase activity, amylopectin maltohydrolase activity

Protein domain

Pfam	PF01373, Glycosyl hydrolase family 14

Metabolic pathway

PWY-6724: starch degradation II

KEGG pathway

PATH:ath00500: Starch and sucrose metabolism

Transcriptional regulation

Regulator:
AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.56	1.17E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.65	3.58E-10
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.68	4.03E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.82	1.08E-03
GSE56094	Col, WT, control 3 h	Col, WT, hrpA- 3 h	-1.55	1.02E-05
GSE56094	Col, WT, control 4 h	Col, WT, PstDC3000 4 h	-1.84	1.76E-07