Gene: AT4G15420
     


Gene description


TAIR ID: AT4G15420

Short description: Ubiquitin fusion degradation UFD1 family protein

Pathogen responsiveness: -0.47

General responsiveness: 0.12

Orthologous


Rice:

OS01G0534800  

Maize:

GRMZM2G053574  

Wheat: No orthologous gene

GO biological process


unkown


GO cellular component


nucleus


GO molecular function


unkown


Protein domain


PfamPF03152, Ubiquitin fusion degradation protein UFD1

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


16 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.991.43E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h1.611.25E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.325.21E-10
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-1.595.00E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.862.10E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.728.36E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.707.01E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h1.974.30E-03
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.173.41E-23
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h1.621.74E-15
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h2.021.68E-20
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.186.29E-23
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.666.72E-16
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h1.551.01E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h2.105.23E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h1.633.05E-03






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.