gene detail

Gene description

TAIR ID: AT4G14790

Short description: ATP-dependent RNA helicase, mitochondrial (SUV3)

Pathogen responsiveness: -2.67

General responsiveness: -3.42

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G078275

Wheat:

TA.23308.3.A1_S_AT

GO biological process

RNA catabolic process, megagametogenesis, RNA metabolic process, mitochondrial RNA 3'-end processing, pollen development

GO cellular component

mitochondrial nucleoid, mitochondrial degradosome, mitochondrion, nucleus

GO molecular function

ATP-dependent RNA helicase activity, ATP binding, RNA binding

Protein domain

Pfam	PF12513, Mitochondrial degradasome RNA helicase subunit C terminal
Pfam	PF00271, Helicase conserved C-terminal domain
SMART	SM00490, HELICc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G51600, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE13739_EDS16_GO view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.87	3.41E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.84	2.78E-02