Gene: AT4G13710
     

Gene description


TAIR ID: AT4G13710

Short description: Pectin lyase-like superfamily protein

Pathogen responsiveness: -1.94

General responsiveness: -2.04

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G131912  

Wheat: No orthologous gene

GO biological process


pectin catabolic process


GO cellular component


extracellular region


GO molecular function


metal ion binding, lyase activity, pectate lyase activity


Protein domain


PfamPF00544, Pectate lyase
SMARTSM00656, Amb_all

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT1G13450, AT5G13790, AT3G16857, AT4G16110, AT1G24260, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.966.92E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-2.281.32E-07
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-2.033.46E-07
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.901.00E-06
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV-1.522.95E-05






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