gene detail

Gene description

TAIR ID: AT4G13100

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -1.05

General responsiveness: -1.10

Orthologous

Rice:

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

nucleus

GO molecular function

unkown

Protein domain

Pfam	PF13920, Zinc finger, C3HC4 type (RING finger)
SMART	SM00184, RING

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	-1.50	3.75E-07
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.54	1.91E-05
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.58	1.66E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.66	8.02E-03
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.01	1.35E-13
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.87	3.36E-05