gene detail

Gene description

TAIR ID: AT4G12800

Short description: photosystem I subunit l

Pathogen responsiveness: -1.06

General responsiveness: 3.48

Orthologous

Rice:

OS12G0420400

Maize:

GRMZM2G026015

Wheat: No orthologous gene

GO biological process

photosynthesis, light reaction

GO cellular component

thylakoid, plastoglobule, chloroplast thylakoid membrane, chloroplast membrane, integral component of membrane, photosystem I reaction center, chloroplast thylakoid, chloroplast envelope, chloroplast, membrane

GO molecular function

protein binding

Protein domain

Pfam	PF02605, Photosystem I reaction centre subunit XI

Metabolic pathway

PHOTOALL-PWY: oxygenic photosynthesis
PWY-101: photosynthesis light reactions

KEGG pathway

PATH:ath00195: Photosynthesis

Transcriptional regulation

Regulator:
AT3G16857, AT4G16110, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.04	3.20E-08
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.55	1.02E-02
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-3.26	1.50E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.01	1.12E-11
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.98	1.43E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.76	5.50E-05
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-2.19	2.10E-11
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.75	5.13E-08