co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G12800

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0005996: monosaccharide metabolic process	0.00E+00
2	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
3	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
4	GO:0046471: phosphatidylglycerol metabolic process	0.00E+00
5	GO:0015717: triose phosphate transport	0.00E+00
6	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
7	GO:0034337: RNA folding	0.00E+00
8	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
9	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
10	GO:0015995: chlorophyll biosynthetic process	8.33E-13
11	GO:0015979: photosynthesis	5.17E-10
12	GO:0019252: starch biosynthetic process	4.85E-07
13	GO:0019253: reductive pentose-phosphate cycle	1.14E-06
14	GO:0010207: photosystem II assembly	1.14E-06
15	GO:0009735: response to cytokinin	3.05E-06
16	GO:0030388: fructose 1,6-bisphosphate metabolic process	3.07E-06
17	GO:1902326: positive regulation of chlorophyll biosynthetic process	3.07E-06
18	GO:0032544: plastid translation	7.85E-06
19	GO:0055114: oxidation-reduction process	9.76E-06
20	GO:0006000: fructose metabolic process	1.11E-05
21	GO:0009773: photosynthetic electron transport in photosystem I	2.49E-05
22	GO:0006094: gluconeogenesis	3.88E-05
23	GO:0010021: amylopectin biosynthetic process	4.54E-05
24	GO:0010600: regulation of auxin biosynthetic process	4.54E-05
25	GO:0009658: chloroplast organization	6.11E-05
26	GO:0009854: oxidative photosynthetic carbon pathway	1.45E-04
27	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.45E-04
28	GO:0009772: photosynthetic electron transport in photosystem II	1.90E-04
29	GO:0010196: nonphotochemical quenching	1.90E-04
30	GO:0032259: methylation	2.31E-04
31	GO:0009704: de-etiolation	2.41E-04
32	GO:0010928: regulation of auxin mediated signaling pathway	2.41E-04
33	GO:0046467: membrane lipid biosynthetic process	2.57E-04
34	GO:0043953: protein transport by the Tat complex	2.57E-04
35	GO:0051775: response to redox state	2.57E-04
36	GO:0071277: cellular response to calcium ion	2.57E-04
37	GO:0000481: maturation of 5S rRNA	2.57E-04
38	GO:0065002: intracellular protein transmembrane transport	2.57E-04
39	GO:0019510: S-adenosylhomocysteine catabolic process	2.57E-04
40	GO:0006002: fructose 6-phosphate metabolic process	2.98E-04
41	GO:0006783: heme biosynthetic process	3.60E-04
42	GO:0006754: ATP biosynthetic process	3.60E-04
43	GO:0006779: porphyrin-containing compound biosynthetic process	4.27E-04
44	GO:0033353: S-adenosylmethionine cycle	5.68E-04
45	GO:0008616: queuosine biosynthetic process	5.68E-04
46	GO:0018119: peptidyl-cysteine S-nitrosylation	5.76E-04
47	GO:0018298: protein-chromophore linkage	6.64E-04
48	GO:0009767: photosynthetic electron transport chain	7.47E-04
49	GO:0005986: sucrose biosynthetic process	7.47E-04
50	GO:0090391: granum assembly	9.22E-04
51	GO:0006518: peptide metabolic process	9.22E-04
52	GO:0035436: triose phosphate transmembrane transport	9.22E-04
53	GO:0044375: regulation of peroxisome size	9.22E-04
54	GO:0034599: cellular response to oxidative stress	9.43E-04
55	GO:0042742: defense response to bacterium	9.80E-04
56	GO:0006636: unsaturated fatty acid biosynthetic process	1.04E-03
57	GO:0010731: protein glutathionylation	1.32E-03
58	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	1.32E-03
59	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.32E-03
60	GO:0071484: cellular response to light intensity	1.32E-03
61	GO:0006107: oxaloacetate metabolic process	1.32E-03
62	GO:0033014: tetrapyrrole biosynthetic process	1.32E-03
63	GO:0031408: oxylipin biosynthetic process	1.39E-03
64	GO:0019748: secondary metabolic process	1.52E-03
65	GO:0006546: glycine catabolic process	1.76E-03
66	GO:0015713: phosphoglycerate transport	1.76E-03
67	GO:0006734: NADH metabolic process	1.76E-03
68	GO:0015976: carbon utilization	1.76E-03
69	GO:0009765: photosynthesis, light harvesting	1.76E-03
70	GO:0006109: regulation of carbohydrate metabolic process	1.76E-03
71	GO:0045727: positive regulation of translation	1.76E-03
72	GO:0006536: glutamate metabolic process	1.76E-03
73	GO:0009409: response to cold	1.90E-03
74	GO:0042631: cellular response to water deprivation	2.10E-03
75	GO:0006656: phosphatidylcholine biosynthetic process	2.25E-03
76	GO:0043097: pyrimidine nucleoside salvage	2.25E-03
77	GO:0009107: lipoate biosynthetic process	2.25E-03
78	GO:0000304: response to singlet oxygen	2.25E-03
79	GO:0006662: glycerol ether metabolic process	2.26E-03
80	GO:0010190: cytochrome b6f complex assembly	2.77E-03
81	GO:0006206: pyrimidine nucleobase metabolic process	2.77E-03
82	GO:0009643: photosynthetic acclimation	2.77E-03
83	GO:0006014: D-ribose metabolic process	2.77E-03
84	GO:0050665: hydrogen peroxide biosynthetic process	2.77E-03
85	GO:0042549: photosystem II stabilization	2.77E-03
86	GO:1901259: chloroplast rRNA processing	3.33E-03
87	GO:0010189: vitamin E biosynthetic process	3.33E-03
88	GO:1900057: positive regulation of leaf senescence	3.93E-03
89	GO:0010161: red light signaling pathway	3.93E-03
90	GO:0010027: thylakoid membrane organization	4.03E-03
91	GO:0032508: DNA duplex unwinding	4.56E-03
92	GO:0016559: peroxisome fission	4.56E-03
93	GO:0048564: photosystem I assembly	4.56E-03
94	GO:0005978: glycogen biosynthetic process	4.56E-03
95	GO:0009642: response to light intensity	4.56E-03
96	GO:0009657: plastid organization	5.22E-03
97	GO:0009932: cell tip growth	5.22E-03
98	GO:0071482: cellular response to light stimulus	5.22E-03
99	GO:0006412: translation	5.64E-03
100	GO:0090333: regulation of stomatal closure	5.92E-03
101	GO:0010206: photosystem II repair	5.92E-03
102	GO:0005982: starch metabolic process	6.64E-03
103	GO:0010205: photoinhibition	6.64E-03
104	GO:0010267: production of ta-siRNAs involved in RNA interference	6.64E-03
105	GO:0016051: carbohydrate biosynthetic process	6.65E-03
106	GO:0009853: photorespiration	6.65E-03
107	GO:0006810: transport	7.10E-03
108	GO:0006782: protoporphyrinogen IX biosynthetic process	7.40E-03
109	GO:0006535: cysteine biosynthetic process from serine	7.40E-03
110	GO:0005975: carbohydrate metabolic process	7.58E-03
111	GO:0043085: positive regulation of catalytic activity	8.19E-03
112	GO:0000272: polysaccharide catabolic process	8.19E-03
113	GO:0009698: phenylpropanoid metabolic process	8.19E-03
114	GO:0010114: response to red light	8.59E-03
115	GO:0016925: protein sumoylation	9.00E-03
116	GO:0006807: nitrogen compound metabolic process	9.85E-03
117	GO:0006108: malate metabolic process	9.85E-03
118	GO:0006006: glucose metabolic process	9.85E-03
119	GO:0018107: peptidyl-threonine phosphorylation	9.85E-03
120	GO:0042254: ribosome biogenesis	9.98E-03
121	GO:0005985: sucrose metabolic process	1.16E-02
122	GO:0006364: rRNA processing	1.16E-02
123	GO:0009585: red, far-red light phototransduction	1.16E-02
124	GO:0007031: peroxisome organization	1.16E-02
125	GO:0019762: glucosinolate catabolic process	1.25E-02
126	GO:0006406: mRNA export from nucleus	1.35E-02
127	GO:0019344: cysteine biosynthetic process	1.35E-02
128	GO:0000027: ribosomal large subunit assembly	1.35E-02
129	GO:0006096: glycolytic process	1.37E-02
130	GO:0009768: photosynthesis, light harvesting in photosystem I	1.45E-02
131	GO:0061077: chaperone-mediated protein folding	1.55E-02
132	GO:0045454: cell redox homeostasis	1.61E-02
133	GO:0030433: ubiquitin-dependent ERAD pathway	1.65E-02
134	GO:0006730: one-carbon metabolic process	1.65E-02
135	GO:0010017: red or far-red light signaling pathway	1.65E-02
136	GO:0016226: iron-sulfur cluster assembly	1.65E-02
137	GO:0009693: ethylene biosynthetic process	1.76E-02
138	GO:0015986: ATP synthesis coupled proton transport	2.32E-02
139	GO:0006633: fatty acid biosynthetic process	2.61E-02
140	GO:0031047: gene silencing by RNA	2.68E-02
141	GO:0007623: circadian rhythm	2.87E-02
142	GO:0009567: double fertilization forming a zygote and endosperm	2.93E-02
143	GO:0042128: nitrate assimilation	3.59E-02
144	GO:0010411: xyloglucan metabolic process	3.73E-02
145	GO:0006950: response to stress	3.73E-02
146	GO:0009416: response to light stimulus	4.28E-02
147	GO:0010218: response to far red light	4.30E-02
148	GO:0007568: aging	4.45E-02
149	GO:0009637: response to blue light	4.75E-02
150	GO:0006099: tricarboxylic acid cycle	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0045550: geranylgeranyl reductase activity	0.00E+00
2	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
3	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
4	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
5	GO:0008974: phosphoribulokinase activity	0.00E+00
6	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
7	GO:0008465: glycerate dehydrogenase activity	0.00E+00
8	GO:0046408: chlorophyll synthetase activity	0.00E+00
9	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
10	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
11	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
12	GO:0035798: 2-alkenal reductase (NADP+) activity	0.00E+00
13	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
14	GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	0.00E+00
15	GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity	0.00E+00
16	GO:0030794: (S)-coclaurine-N-methyltransferase activity	0.00E+00
17	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
18	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
19	GO:0090711: FMN hydrolase activity	0.00E+00
20	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
21	GO:0019843: rRNA binding	2.27E-08
22	GO:0016851: magnesium chelatase activity	9.77E-08
23	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	3.07E-06
24	GO:0018708: thiol S-methyltransferase activity	3.07E-06
25	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	3.07E-06
26	GO:0009011: starch synthase activity	4.54E-05
27	GO:0043495: protein anchor	4.54E-05
28	GO:0019899: enzyme binding	1.90E-04
29	GO:0004325: ferrochelatase activity	2.57E-04
30	GO:0008746: NAD(P)+ transhydrogenase activity	2.57E-04
31	GO:0035671: enone reductase activity	2.57E-04
32	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	2.57E-04
33	GO:0004013: adenosylhomocysteinase activity	2.57E-04
34	GO:0008168: methyltransferase activity	3.76E-04
35	GO:0003735: structural constituent of ribosome	4.71E-04
36	GO:0030234: enzyme regulator activity	4.99E-04
37	GO:0016168: chlorophyll binding	5.09E-04
38	GO:0016491: oxidoreductase activity	5.43E-04
39	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	5.68E-04
40	GO:0000234: phosphoethanolamine N-methyltransferase activity	5.68E-04
41	GO:0050017: L-3-cyanoalanine synthase activity	5.68E-04
42	GO:0008883: glutamyl-tRNA reductase activity	5.68E-04
43	GO:0010297: heteropolysaccharide binding	5.68E-04
44	GO:0009977: proton motive force dependent protein transmembrane transporter activity	5.68E-04
45	GO:0004047: aminomethyltransferase activity	5.68E-04
46	GO:0033201: alpha-1,4-glucan synthase activity	5.68E-04
47	GO:0008479: queuine tRNA-ribosyltransferase activity	5.68E-04
48	GO:0003844: 1,4-alpha-glucan branching enzyme activity	5.68E-04
49	GO:0031072: heat shock protein binding	7.47E-04
50	GO:0004565: beta-galactosidase activity	7.47E-04
51	GO:0008266: poly(U) RNA binding	8.40E-04
52	GO:0071917: triose-phosphate transmembrane transporter activity	9.22E-04
53	GO:0019948: SUMO activating enzyme activity	9.22E-04
54	GO:0010277: chlorophyllide a oxygenase [overall] activity	9.22E-04
55	GO:0043169: cation binding	9.22E-04
56	GO:0004373: glycogen (starch) synthase activity	9.22E-04
57	GO:0016992: lipoate synthase activity	9.22E-04
58	GO:0004185: serine-type carboxypeptidase activity	1.22E-03
59	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	1.32E-03
60	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.32E-03
61	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	1.32E-03
62	GO:0004351: glutamate decarboxylase activity	1.32E-03
63	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	1.32E-03
64	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	1.32E-03
65	GO:0042802: identical protein binding	1.49E-03
66	GO:0051287: NAD binding	1.55E-03
67	GO:0022891: substrate-specific transmembrane transporter activity	1.65E-03
68	GO:0008891: glycolate oxidase activity	1.76E-03
69	GO:0015120: phosphoglycerate transmembrane transporter activity	1.76E-03
70	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.76E-03
71	GO:0008453: alanine-glyoxylate transaminase activity	1.76E-03
72	GO:0047134: protein-disulfide reductase activity	1.95E-03
73	GO:0004791: thioredoxin-disulfide reductase activity	2.43E-03
74	GO:0042578: phosphoric ester hydrolase activity	2.77E-03
75	GO:0016615: malate dehydrogenase activity	2.77E-03
76	GO:0004332: fructose-bisphosphate aldolase activity	2.77E-03
77	GO:0048038: quinone binding	2.79E-03
78	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.18E-03
79	GO:0004747: ribokinase activity	3.33E-03
80	GO:0030060: L-malate dehydrogenase activity	3.33E-03
81	GO:0004124: cysteine synthase activity	3.33E-03
82	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	3.33E-03
83	GO:0004849: uridine kinase activity	3.33E-03
84	GO:0004033: aldo-keto reductase (NADP) activity	4.56E-03
85	GO:0008865: fructokinase activity	4.56E-03
86	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	5.22E-03
87	GO:0004222: metalloendopeptidase activity	5.79E-03
88	GO:0071949: FAD binding	5.92E-03
89	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	5.92E-03
90	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	6.64E-03
91	GO:0008047: enzyme activator activity	7.40E-03
92	GO:0050661: NADP binding	7.59E-03
93	GO:0051537: 2 iron, 2 sulfur cluster binding	9.29E-03
94	GO:0043621: protein self-association	9.29E-03
95	GO:0004089: carbonate dehydratase activity	9.85E-03
96	GO:0031409: pigment binding	1.25E-02
97	GO:0051536: iron-sulfur cluster binding	1.35E-02
98	GO:0004857: enzyme inhibitor activity	1.35E-02
99	GO:0005528: FK506 binding	1.35E-02
100	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.42E-02
101	GO:0051082: unfolded protein binding	1.65E-02
102	GO:0015035: protein disulfide oxidoreductase activity	1.70E-02
103	GO:0003727: single-stranded RNA binding	1.86E-02
104	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	2.20E-02
105	GO:0030170: pyridoxal phosphate binding	2.30E-02
106	GO:0050662: coenzyme binding	2.32E-02
107	GO:0010181: FMN binding	2.32E-02
108	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.56E-02
109	GO:0008483: transaminase activity	3.06E-02
110	GO:0016722: oxidoreductase activity, oxidizing metal ions	3.06E-02
111	GO:0016887: ATPase activity	3.62E-02
112	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.73E-02
113	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.87E-02
114	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.45E-02
115	GO:0003746: translation elongation factor activity	4.75E-02