Gene: AT4G12570
     

Gene description


TAIR ID: AT4G12570

Short description: ubiquitin protein ligase 5

Pathogen responsiveness: -1.94

General responsiveness: -2.84

GO biological process


response to hydrogen peroxide, protein ubiquitination, cellular protein modification process, response to jasmonic acid, leaf senescence


GO cellular component


cytoplasm, nucleus


GO molecular function


ubiquitin-protein transferase activity, protein binding, carbohydrate binding, ubiquitin protein ligase activity


Protein domain


PfamPF00632, HECT-domain (ubiquitin-transferase)
PfamPF00240, Ubiquitin family
SMARTSM00213, UBQ
SMARTSM00119, HECTc

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT1G24260

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.651.90E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.602.61E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.765.10E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.963.80E-12






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