Gene: AT4G09960
     


Gene description


TAIR ID: AT4G09960

Short description: K-box region and MADS-box transcription factor family protein

Pathogen responsiveness: -2.58

General responsiveness: -4.74

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


plant ovule development, multicellular organism development, regulation of transcription, DNA-templated, seed development, seed coat development, transcription, positive regulation of transcription from RNA polymerase II promoter, integument development, regulation of cell wall organization or biogenesis, regulation of cell division, regulation of double fertilization forming a zygote and endosperm, carpel development


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, protein binding, RNA polymerase II regulatory region sequence-specific DNA binding, protein dimerization activity


Protein domain


PfamPF00319, SRF-type transcription factor (DNA-binding and dimerisation domain)
PfamPF01486, K-box region
SMARTSM00432, MADS

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G01930, AT1G14685, AT5G61850, AT2G01930

Target:
AT1G24260, AT3G58780, AT4G18960, AT2G42830

Protein-protein interaction network


The number of partners (degree) is: 14 (Top20%)

click to view PPI network

Coexpression network

GSE13739_EDS16_GO  view

Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-3.673.41E-06






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