Gene: AT4G09020
     

Gene description


TAIR ID: AT4G09020

Short description: isoamylase 3

Pathogen responsiveness: -0.61

General responsiveness: 0.09

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G150796  

Wheat: No orthologous gene

GO biological process


starch catabolic process, carbohydrate metabolic process


GO cellular component


chloroplast stroma, chloroplast starch grain, chloroplast


GO molecular function


isoamylase activity, alpha-amylase activity


Protein domain


PfamPF02922, Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
PfamPF00128, Alpha amylase, catalytic domain
SMARTSM00642, Aamy

Transcriptional regulation


Regulator:
AT4G16110, AT4G36990

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


9 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.056.87E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.248.34E-11
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.717.36E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.961.19E-03
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.698.76E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.843.37E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.773.99E-12
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h-1.632.00E-02
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h1.641.85E-04






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