gene detail

Gene description

TAIR ID: AT4G08470

Short description: MAPK/ERK kinase kinase 3

Pathogen responsiveness: -0.16

General responsiveness: -0.92

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of mitotic cell cycle, stress-activated protein kinase signaling cascade, protein phosphorylation, signal transduction by protein phosphorylation, activation of protein kinase activity

GO cellular component

cytoplasm, nucleus

GO molecular function

MAP kinase kinase kinase activity, ATP binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity

Protein domain

Pfam	PF00069, Protein kinase domain
SMART	SM00220, S_TKc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

17 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18329	Col, WT, control	Col, WT, Hpa noco2 96 h	1.61	4.68E-10
GSE18329	Col, wrky72_1, control	Col, wrky72_1, Hpa noco2 96 h	2.34	8.43E-13
GSE18329	Col, wrky72_1, control	Col, wrky72_2, Hpa noco2 96 h	2.23	1.97E-12
GSE20278	Col, RPL18-HF, control, polysomal RNA	Col, RPL18-HF, TuMV 10 d, polysomal RNA	1.72	1.44E-02
GSE20278	Col, RPL18-HF, control	Col, RPL18-HF, TuMV 10 d	1.73	1.08E-02
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.01	2.17E-10
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	1.54	3.13E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	1.53	3.57E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	2.93	2.05E-15
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	2.54	1.82E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	2.37	3.07E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.81	1.56E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	2.06	1.72E-13
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.97	4.03E-10
GSE5616	Col, WT, water 24 h	Col, WT, P. infestans 24 h	1.84	1.50E-05
GSE6556	Col, WT, control	Col, WT, PstDC3000 AvrRpt2 48 h	1.61	4.28E-04
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	2.47	2.31E-06