Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G08470

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010055: atrichoblast differentiation0.00E+00
2GO:0006654: phosphatidic acid biosynthetic process0.00E+00
3GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
4GO:0002084: protein depalmitoylation0.00E+00
5GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
6GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
7GO:0010793: regulation of mRNA export from nucleus0.00E+00
8GO:0034756: regulation of iron ion transport0.00E+00
9GO:0046865: terpenoid transport0.00E+00
10GO:0036503: ERAD pathway0.00E+00
11GO:0072722: response to amitrole0.00E+00
12GO:0009814: defense response, incompatible interaction3.62E-05
13GO:0006623: protein targeting to vacuole1.05E-04
14GO:0051707: response to other organism1.12E-04
15GO:0009225: nucleotide-sugar metabolic process2.39E-04
16GO:0009627: systemic acquired resistance2.74E-04
17GO:0031123: RNA 3'-end processing5.03E-04
18GO:0009868: jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway5.03E-04
19GO:0015760: glucose-6-phosphate transport5.03E-04
20GO:0099132: ATP hydrolysis coupled cation transmembrane transport5.03E-04
21GO:0002143: tRNA wobble position uridine thiolation5.03E-04
22GO:0098789: pre-mRNA cleavage required for polyadenylation5.03E-04
23GO:0009700: indole phytoalexin biosynthetic process5.03E-04
24GO:0042539: hypotonic salinity response5.03E-04
25GO:0010230: alternative respiration5.03E-04
26GO:0019673: GDP-mannose metabolic process5.03E-04
27GO:0042868: antisense RNA metabolic process5.03E-04
28GO:0032107: regulation of response to nutrient levels5.03E-04
29GO:0071446: cellular response to salicylic acid stimulus5.20E-04
30GO:1900150: regulation of defense response to fungus6.48E-04
31GO:0015780: nucleotide-sugar transport9.43E-04
32GO:1902066: regulation of cell wall pectin metabolic process1.08E-03
33GO:0050684: regulation of mRNA processing1.08E-03
34GO:0042853: L-alanine catabolic process1.08E-03
35GO:0019725: cellular homeostasis1.08E-03
36GO:0051252: regulation of RNA metabolic process1.08E-03
37GO:0015712: hexose phosphate transport1.08E-03
38GO:0006996: organelle organization1.08E-03
39GO:0009156: ribonucleoside monophosphate biosynthetic process1.08E-03
40GO:0035335: peptidyl-tyrosine dephosphorylation1.08E-03
41GO:0015709: thiosulfate transport1.08E-03
42GO:0071422: succinate transmembrane transport1.08E-03
43GO:0046939: nucleotide phosphorylation1.08E-03
44GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.08E-03
45GO:0090332: stomatal closure1.11E-03
46GO:0048268: clathrin coat assembly1.11E-03
47GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.11E-03
48GO:0051607: defense response to virus1.52E-03
49GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process1.77E-03
50GO:0010272: response to silver ion1.77E-03
51GO:0015692: lead ion transport1.77E-03
52GO:0015714: phosphoenolpyruvate transport1.77E-03
53GO:0060968: regulation of gene silencing1.77E-03
54GO:0080168: abscisic acid transport1.77E-03
55GO:0048586: regulation of long-day photoperiodism, flowering1.77E-03
56GO:0032922: circadian regulation of gene expression1.77E-03
57GO:0032784: regulation of DNA-templated transcription, elongation1.77E-03
58GO:0061158: 3'-UTR-mediated mRNA destabilization1.77E-03
59GO:0017006: protein-tetrapyrrole linkage1.77E-03
60GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.77E-03
61GO:0035436: triose phosphate transmembrane transport1.77E-03
62GO:0010253: UDP-rhamnose biosynthetic process1.77E-03
63GO:1901672: positive regulation of systemic acquired resistance1.77E-03
64GO:0045836: positive regulation of meiotic nuclear division1.77E-03
65GO:0010186: positive regulation of cellular defense response1.77E-03
66GO:0015783: GDP-fucose transport1.77E-03
67GO:0006626: protein targeting to mitochondrion1.95E-03
68GO:0015729: oxaloacetate transport2.57E-03
69GO:0009584: detection of visible light2.57E-03
70GO:0072334: UDP-galactose transmembrane transport2.57E-03
71GO:0010731: protein glutathionylation2.57E-03
72GO:0010104: regulation of ethylene-activated signaling pathway2.57E-03
73GO:1902290: positive regulation of defense response to oomycetes2.57E-03
74GO:0032877: positive regulation of DNA endoreduplication2.57E-03
75GO:0055089: fatty acid homeostasis2.57E-03
76GO:0000187: activation of MAPK activity2.57E-03
77GO:0009407: toxin catabolic process2.61E-03
78GO:0042742: defense response to bacterium3.14E-03
79GO:0060548: negative regulation of cell death3.46E-03
80GO:0033320: UDP-D-xylose biosynthetic process3.46E-03
81GO:0010363: regulation of plant-type hypersensitive response3.46E-03
82GO:0015713: phosphoglycerate transport3.46E-03
83GO:0007112: male meiosis cytokinesis3.46E-03
84GO:0009165: nucleotide biosynthetic process3.46E-03
85GO:0010109: regulation of photosynthesis3.46E-03
86GO:0009435: NAD biosynthetic process4.44E-03
87GO:0045927: positive regulation of growth4.44E-03
88GO:0098719: sodium ion import across plasma membrane4.44E-03
89GO:0071423: malate transmembrane transport4.44E-03
90GO:0031365: N-terminal protein amino acid modification4.44E-03
91GO:0009636: response to toxic substance5.01E-03
92GO:0006777: Mo-molybdopterin cofactor biosynthetic process5.50E-03
93GO:0010264: myo-inositol hexakisphosphate biosynthetic process5.50E-03
94GO:0042732: D-xylose metabolic process5.50E-03
95GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity5.50E-03
96GO:0060918: auxin transport5.50E-03
97GO:0045040: protein import into mitochondrial outer membrane5.50E-03
98GO:0006139: nucleobase-containing compound metabolic process5.50E-03
99GO:0042176: regulation of protein catabolic process5.50E-03
100GO:0010315: auxin efflux5.50E-03
101GO:0009643: photosynthetic acclimation5.50E-03
102GO:0035435: phosphate ion transmembrane transport5.50E-03
103GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response6.63E-03
104GO:0000911: cytokinesis by cell plate formation6.63E-03
105GO:0009861: jasmonic acid and ethylene-dependent systemic resistance6.63E-03
106GO:0010183: pollen tube guidance7.04E-03
107GO:0007050: cell cycle arrest7.85E-03
108GO:1900056: negative regulation of leaf senescence7.85E-03
109GO:0080186: developmental vegetative growth7.85E-03
110GO:0000122: negative regulation of transcription from RNA polymerase II promoter7.85E-03
111GO:2000014: regulation of endosperm development7.85E-03
112GO:0008272: sulfate transport7.85E-03
113GO:0006952: defense response8.78E-03
114GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline9.14E-03
115GO:0009819: drought recovery9.14E-03
116GO:0006972: hyperosmotic response1.05E-02
117GO:2000031: regulation of salicylic acid mediated signaling pathway1.05E-02
118GO:0006002: fructose 6-phosphate metabolic process1.05E-02
119GO:0022900: electron transport chain1.05E-02
120GO:0001558: regulation of cell growth1.05E-02
121GO:0010120: camalexin biosynthetic process1.05E-02
122GO:0016310: phosphorylation1.08E-02
123GO:0009615: response to virus1.10E-02
124GO:0009816: defense response to bacterium, incompatible interaction1.16E-02
125GO:0010112: regulation of systemic acquired resistance1.19E-02
126GO:0048589: developmental growth1.19E-02
127GO:0006888: ER to Golgi vesicle-mediated transport1.29E-02
128GO:0010267: production of ta-siRNAs involved in RNA interference1.34E-02
129GO:0008202: steroid metabolic process1.34E-02
130GO:0051453: regulation of intracellular pH1.34E-02
131GO:1900426: positive regulation of defense response to bacterium1.34E-02
132GO:0008219: cell death1.43E-02
133GO:0015031: protein transport1.46E-02
134GO:0051555: flavonol biosynthetic process1.50E-02
135GO:0006032: chitin catabolic process1.50E-02
136GO:0043069: negative regulation of programmed cell death1.50E-02
137GO:0009089: lysine biosynthetic process via diaminopimelate1.66E-02
138GO:0000272: polysaccharide catabolic process1.66E-02
139GO:0009631: cold acclimation1.66E-02
140GO:0010043: response to zinc ion1.66E-02
141GO:0007165: signal transduction1.74E-02
142GO:0000724: double-strand break repair via homologous recombination1.74E-02
143GO:0008361: regulation of cell size1.83E-02
144GO:0006790: sulfur compound metabolic process1.83E-02
145GO:0016925: protein sumoylation1.83E-02
146GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.83E-02
147GO:0010150: leaf senescence1.99E-02
148GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process2.01E-02
149GO:0010102: lateral root morphogenesis2.01E-02
150GO:2000028: regulation of photoperiodism, flowering2.01E-02
151GO:0050826: response to freezing2.01E-02
152GO:0055046: microgametogenesis2.01E-02
153GO:0006897: endocytosis2.17E-02
154GO:0006631: fatty acid metabolic process2.17E-02
155GO:0007034: vacuolar transport2.18E-02
156GO:0006541: glutamine metabolic process2.18E-02
157GO:0002237: response to molecule of bacterial origin2.18E-02
158GO:0042343: indole glucosinolate metabolic process2.37E-02
159GO:0007030: Golgi organization2.37E-02
160GO:0010039: response to iron ion2.37E-02
161GO:0071732: cellular response to nitric oxide2.37E-02
162GO:0070588: calcium ion transmembrane transport2.37E-02
163GO:0046854: phosphatidylinositol phosphorylation2.37E-02
164GO:0010053: root epidermal cell differentiation2.37E-02
165GO:0000209: protein polyubiquitination2.45E-02
166GO:0009617: response to bacterium2.49E-02
167GO:0008643: carbohydrate transport2.55E-02
168GO:0006636: unsaturated fatty acid biosynthetic process2.56E-02
169GO:0006855: drug transmembrane transport2.75E-02
170GO:0009116: nucleoside metabolic process2.76E-02
171GO:0006289: nucleotide-excision repair2.76E-02
172GO:0000165: MAPK cascade2.85E-02
173GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.85E-02
174GO:0043622: cortical microtubule organization2.96E-02
175GO:0098542: defense response to other organism3.16E-02
176GO:0006334: nucleosome assembly3.16E-02
177GO:0031408: oxylipin biosynthetic process3.16E-02
178GO:0051321: meiotic cell cycle3.16E-02
179GO:0048278: vesicle docking3.16E-02
180GO:0016998: cell wall macromolecule catabolic process3.16E-02
181GO:0010017: red or far-red light signaling pathway3.38E-02
182GO:2000022: regulation of jasmonic acid mediated signaling pathway3.38E-02
183GO:0030433: ubiquitin-dependent ERAD pathway3.38E-02
184GO:0080092: regulation of pollen tube growth3.38E-02
185GO:0071456: cellular response to hypoxia3.38E-02
186GO:0006012: galactose metabolic process3.59E-02
187GO:0071369: cellular response to ethylene stimulus3.59E-02
188GO:0009625: response to insect3.59E-02
189GO:0010227: floral organ abscission3.59E-02
190GO:0042127: regulation of cell proliferation3.81E-02
191GO:0009306: protein secretion3.81E-02
192GO:0042147: retrograde transport, endosome to Golgi4.04E-02
193GO:0009620: response to fungus4.11E-02
194GO:0008033: tRNA processing4.27E-02
195GO:0010051: xylem and phloem pattern formation4.27E-02
196GO:0006468: protein phosphorylation4.42E-02
197GO:0009958: positive gravitropism4.50E-02
198GO:0009960: endosperm development4.50E-02
199GO:0048544: recognition of pollen4.73E-02
200GO:0061025: membrane fusion4.73E-02
201GO:0006814: sodium ion transport4.73E-02
202GO:0009749: response to glucose4.97E-02
RankGO TermAdjusted P value
1GO:0051766: inositol trisphosphate kinase activity0.00E+00
2GO:0061604: molybdopterin-synthase sulfurtransferase activity0.00E+00
3GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
4GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
5GO:0008092: cytoskeletal protein binding0.00E+00
6GO:0008734: L-aspartate oxidase activity0.00E+00
7GO:0051670: inulinase activity0.00E+00
8GO:0051765: inositol tetrakisphosphate kinase activity0.00E+00
9GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
10GO:0061605: molybdopterin-synthase adenylyltransferase activity0.00E+00
11GO:0034338: short-chain carboxylesterase activity0.00E+00
12GO:0019205: nucleobase-containing compound kinase activity0.00E+00
13GO:2001227: quercitrin binding5.03E-04
14GO:0000824: inositol tetrakisphosphate 3-kinase activity5.03E-04
15GO:0047326: inositol tetrakisphosphate 5-kinase activity5.03E-04
16GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity5.03E-04
17GO:0051669: fructan beta-fructosidase activity5.03E-04
18GO:0008446: GDP-mannose 4,6-dehydratase activity5.03E-04
19GO:0031219: levanase activity5.03E-04
20GO:2001147: camalexin binding5.03E-04
21GO:0010285: L,L-diaminopimelate aminotransferase activity5.03E-04
22GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity5.03E-04
23GO:0004708: MAP kinase kinase activity6.48E-04
24GO:0015297: antiporter activity1.00E-03
25GO:0010280: UDP-L-rhamnose synthase activity1.08E-03
26GO:0015152: glucose-6-phosphate transmembrane transporter activity1.08E-03
27GO:0008428: ribonuclease inhibitor activity1.08E-03
28GO:0008805: carbon-monoxide oxygenase activity1.08E-03
29GO:0004338: glucan exo-1,3-beta-glucosidase activity1.08E-03
30GO:1901677: phosphate transmembrane transporter activity1.08E-03
31GO:0050377: UDP-glucose 4,6-dehydratase activity1.08E-03
32GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity1.08E-03
33GO:0015117: thiosulfate transmembrane transporter activity1.08E-03
34GO:0004566: beta-glucuronidase activity1.08E-03
35GO:0009883: red or far-red light photoreceptor activity1.08E-03
36GO:0004809: tRNA (guanine-N2-)-methyltransferase activity1.08E-03
37GO:0008460: dTDP-glucose 4,6-dehydratase activity1.08E-03
38GO:0005545: 1-phosphatidylinositol binding1.29E-03
39GO:0004568: chitinase activity1.29E-03
40GO:0000030: mannosyltransferase activity1.77E-03
41GO:0008265: Mo-molybdopterin cofactor sulfurase activity1.77E-03
42GO:0005310: dicarboxylic acid transmembrane transporter activity1.77E-03
43GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.77E-03
44GO:0008020: G-protein coupled photoreceptor activity1.77E-03
45GO:0015141: succinate transmembrane transporter activity1.77E-03
46GO:0071917: triose-phosphate transmembrane transporter activity1.77E-03
47GO:0005457: GDP-fucose transmembrane transporter activity1.77E-03
48GO:0022857: transmembrane transporter activity1.88E-03
49GO:0030247: polysaccharide binding2.02E-03
50GO:0004867: serine-type endopeptidase inhibitor activity2.47E-03
51GO:0017077: oxidative phosphorylation uncoupler activity2.57E-03
52GO:0004749: ribose phosphate diphosphokinase activity2.57E-03
53GO:0015131: oxaloacetate transmembrane transporter activity2.57E-03
54GO:0035529: NADH pyrophosphatase activity2.57E-03
55GO:0019201: nucleotide kinase activity2.57E-03
56GO:0004792: thiosulfate sulfurtransferase activity2.57E-03
57GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity2.57E-03
58GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity2.57E-03
59GO:0016301: kinase activity3.05E-03
60GO:0009916: alternative oxidase activity3.46E-03
61GO:0015120: phosphoglycerate transmembrane transporter activity3.46E-03
62GO:0004364: glutathione transferase activity4.10E-03
63GO:0005459: UDP-galactose transmembrane transporter activity4.44E-03
64GO:0008641: small protein activating enzyme activity4.44E-03
65GO:0045300: acyl-[acyl-carrier-protein] desaturase activity4.44E-03
66GO:0004623: phospholipase A2 activity4.44E-03
67GO:0008948: oxaloacetate decarboxylase activity4.44E-03
68GO:0031386: protein tag4.44E-03
69GO:0047631: ADP-ribose diphosphatase activity4.44E-03
70GO:0004040: amidase activity4.44E-03
71GO:0048040: UDP-glucuronate decarboxylase activity5.50E-03
72GO:0008474: palmitoyl-(protein) hydrolase activity5.50E-03
73GO:0047714: galactolipase activity5.50E-03
74GO:0000210: NAD+ diphosphatase activity5.50E-03
75GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity5.50E-03
76GO:0035252: UDP-xylosyltransferase activity5.50E-03
77GO:0030276: clathrin binding6.10E-03
78GO:0016853: isomerase activity6.56E-03
79GO:0070403: NAD+ binding6.63E-03
80GO:0004017: adenylate kinase activity6.63E-03
81GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity6.63E-03
82GO:0004656: procollagen-proline 4-dioxygenase activity6.63E-03
83GO:0005338: nucleotide-sugar transmembrane transporter activity7.85E-03
84GO:0008235: metalloexopeptidase activity7.85E-03
85GO:0102425: myricetin 3-O-glucosyltransferase activity7.85E-03
86GO:0102360: daphnetin 3-O-glucosyltransferase activity7.85E-03
87GO:0008121: ubiquinol-cytochrome-c reductase activity7.85E-03
88GO:0016621: cinnamoyl-CoA reductase activity7.85E-03
89GO:0009881: photoreceptor activity7.85E-03
90GO:0003872: 6-phosphofructokinase activity7.85E-03
91GO:0015140: malate transmembrane transporter activity7.85E-03
92GO:0008320: protein transmembrane transporter activity7.85E-03
93GO:0043295: glutathione binding7.85E-03
94GO:0004620: phospholipase activity7.85E-03
95GO:0047893: flavonol 3-O-glucosyltransferase activity9.14E-03
96GO:0004034: aldose 1-epimerase activity9.14E-03
97GO:0004525: ribonuclease III activity9.14E-03
98GO:0005544: calcium-dependent phospholipid binding9.14E-03
99GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity9.74E-03
100GO:0008142: oxysterol binding1.05E-02
101GO:0008970: phosphatidylcholine 1-acylhydrolase activity1.05E-02
102GO:0004806: triglyceride lipase activity1.29E-02
103GO:0031490: chromatin DNA binding1.34E-02
104GO:0030234: enzyme regulator activity1.50E-02
105GO:0004222: metalloendopeptidase activity1.58E-02
106GO:0047372: acylglycerol lipase activity1.66E-02
107GO:0015386: potassium:proton antiporter activity1.66E-02
108GO:0004177: aminopeptidase activity1.66E-02
109GO:0008559: xenobiotic-transporting ATPase activity1.66E-02
110GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.82E-02
111GO:0015116: sulfate transmembrane transporter activity1.83E-02
112GO:0000049: tRNA binding1.83E-02
113GO:0016787: hydrolase activity1.85E-02
114GO:0005388: calcium-transporting ATPase activity2.01E-02
115GO:0004565: beta-galactosidase activity2.01E-02
116GO:0005315: inorganic phosphate transmembrane transporter activity2.01E-02
117GO:0000155: phosphorelay sensor kinase activity2.01E-02
118GO:0046872: metal ion binding2.15E-02
119GO:0031624: ubiquitin conjugating enzyme binding2.18E-02
120GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.18E-02
121GO:0008061: chitin binding2.37E-02
122GO:0003712: transcription cofactor activity2.37E-02
123GO:0004725: protein tyrosine phosphatase activity2.56E-02
124GO:0001046: core promoter sequence-specific DNA binding2.76E-02
125GO:0031418: L-ascorbic acid binding2.76E-02
126GO:0004674: protein serine/threonine kinase activity2.79E-02
127GO:0035251: UDP-glucosyltransferase activity3.16E-02
128GO:0004707: MAP kinase activity3.16E-02
129GO:0008408: 3'-5' exonuclease activity3.16E-02
130GO:0016298: lipase activity3.28E-02
131GO:0031625: ubiquitin protein ligase binding3.51E-02
132GO:0008810: cellulase activity3.59E-02
133GO:0045735: nutrient reservoir activity3.75E-02
134GO:0003727: single-stranded RNA binding3.81E-02
135GO:0043531: ADP binding3.86E-02
136GO:0005524: ATP binding3.95E-02
137GO:0005102: receptor binding4.04E-02
138GO:0047134: protein-disulfide reductase activity4.04E-02
139GO:0001085: RNA polymerase II transcription factor binding4.50E-02
140GO:0004527: exonuclease activity4.50E-02
141GO:0004791: thioredoxin-disulfide reductase activity4.73E-02
142GO:0010181: FMN binding4.73E-02
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Gene type



Gene DE type