gene detail

Gene description

TAIR ID: AT4G05410

Short description: Transducin/WD40 repeat-like superfamily protein

Pathogen responsiveness: -2.02

General responsiveness: -0.74

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G015005

Wheat: No orthologous gene

GO biological process

mitochondrial fission, acceptance of pollen, embryo sac development, rRNA processing, embryo development ending in seed dormancy

GO cellular component

Cul4-RING E3 ubiquitin ligase complex, nucleolus, small-subunit processome, anaphase-promoting complex, small nucleolar ribonucleoprotein complex, cytoplasm

GO molecular function

snoRNA binding

Protein domain

Pfam	PF00400, WD domain, G-beta repeat
SMART	SM00320, WD40

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G41315, AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.55	2.79E-02
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.70	3.29E-03