Gene: AT4G05050
     

Gene description


TAIR ID: AT4G05050

Short description: ubiquitin 11

Pathogen responsiveness: -1.38

General responsiveness: -0.90

GO biological process


cellular protein modification process, ubiquitin-dependent protein catabolic process


GO cellular component


cytoplasm, intracellular, nucleus


GO molecular function


unkown


Protein domain


PfamPF00240, Ubiquitin family
SMARTSM00213, UBQ

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G19290, AT1G45249, AT1G24260, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, WT, water 4 hCol, WT, Flg22 4 h1.632.58E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.163.39E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.603.29E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.105.34E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.075.78E-14






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.