gene detail

Gene description

TAIR ID: AT4G02075

Short description: RING/FYVE/PHD zinc finger superfamily protein

Pathogen responsiveness: -0.68

General responsiveness: -1.26

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

plasma membrane, cytoplasm, integral component of membrane

GO molecular function

zinc ion binding

Protein domain

Pfam	PF12428, Protein of unknown function (DUF3675)
Pfam	PF12906, RING-variant domain
SMART	SM00744, RINGv

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT2G43010, AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE13739_WT_GO view
GSE13739_EDS16_GO view

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, ERF104 ox, water 4 h	Col, ERF104 ox, Flg22 4 h	2.03	2.36E-02
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	1.65	3.81E-02
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-1.53	7.34E-04
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-1.75	1.03E-04
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.07	2.36E-03
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	1.72	2.96E-09
GSE5615	Col, WT, water 4 h	Col, WT, Flg22 4 h	1.61	2.76E-04
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	1.70	8.38E-05
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.57	3.06E-03