Gene: AT4G00870
     

Gene description


TAIR ID: AT4G00870

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: -0.81

General responsiveness: -4.44

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, transcription, negative regulation of gene expression


GO cellular component


nucleus


GO molecular function


protein dimerization activity, transcription factor activity, sequence-specific DNA binding, protein binding, DNA binding


Protein domain


PfamPF14215, bHLH-MYC and R2R3-MYB transcription factors N-terminal
PfamPF00010, Helix-loop-helix DNA-binding domain
SMARTSM00353, HLH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 10 (Top20%)

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


7 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.593.29E-02
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.957.74E-03
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.022.08E-02
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h-1.822.57E-02
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-4.435.90E-06
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h-2.424.06E-03
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-5.473.88E-07






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