Gene: AT3G62910
     


Gene description


TAIR ID: AT3G62910

Short description: Peptide chain release factor 1

Pathogen responsiveness: 0.09

General responsiveness: 1.43

Orthologous


Rice:

OS11G0657100  

Maize:

GRMZM2G070723  

Wheat: No orthologous gene

GO biological process


plastid translation, chloroplast organization, translational termination, thylakoid membrane organization, regulation of growth


GO cellular component


plastid, chloroplast


GO molecular function


translation release factor activity, codon specific


Protein domain


PfamPF00472, RF-1 domain
PfamPF03462, PCRF domain
SMARTSM00937, PCRF

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


18 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.702.88E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.603.16E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.124.40E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.601.97E-10
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.873.08E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.731.22E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-2.022.85E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.612.33E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.564.16E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.972.47E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-3.054.10E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.031.52E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.791.13E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.743.58E-11
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.192.83E-06
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.964.96E-07
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.573.66E-11
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-1.672.72E-04






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.