Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G62910

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0034337: RNA folding0.00E+00
2GO:0016553: base conversion or substitution editing0.00E+00
3GO:0006429: leucyl-tRNA aminoacylation0.00E+00
4GO:0060416: response to growth hormone0.00E+00
5GO:0018023: peptidyl-lysine trimethylation0.00E+00
6GO:0042820: vitamin B6 catabolic process0.00E+00
7GO:0099131: ATP hydrolysis coupled ion transmembrane transport0.00E+00
8GO:0002184: cytoplasmic translational termination0.00E+00
9GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
10GO:0042493: response to drug0.00E+00
11GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
12GO:1905499: trichome papilla formation0.00E+00
13GO:0033494: ferulate metabolic process0.00E+00
14GO:0006399: tRNA metabolic process0.00E+00
15GO:2000121: regulation of removal of superoxide radicals0.00E+00
16GO:0061635: regulation of protein complex stability0.00E+00
17GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
18GO:0006437: tyrosyl-tRNA aminoacylation0.00E+00
19GO:0006642: triglyceride mobilization0.00E+00
20GO:0018160: peptidyl-pyrromethane cofactor linkage0.00E+00
21GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
22GO:0042821: pyridoxal biosynthetic process0.00E+00
23GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
24GO:0006223: uracil salvage0.00E+00
25GO:1902458: positive regulation of stomatal opening0.00E+00
26GO:0070125: mitochondrial translational elongation0.00E+00
27GO:0097164: ammonium ion metabolic process0.00E+00
28GO:0015995: chlorophyll biosynthetic process8.61E-20
29GO:0009658: chloroplast organization1.21E-12
30GO:0015979: photosynthesis2.58E-10
31GO:0010027: thylakoid membrane organization3.71E-10
32GO:0032544: plastid translation3.72E-10
33GO:0006412: translation2.87E-09
34GO:0006782: protoporphyrinogen IX biosynthetic process4.46E-09
35GO:0010207: photosystem II assembly4.70E-08
36GO:0009735: response to cytokinin5.86E-07
37GO:0006783: heme biosynthetic process2.31E-06
38GO:0090391: granum assembly3.31E-06
39GO:0042254: ribosome biogenesis3.56E-06
40GO:0006779: porphyrin-containing compound biosynthetic process3.85E-06
41GO:0006633: fatty acid biosynthetic process8.43E-06
42GO:0009773: photosynthetic electron transport in photosystem I9.24E-06
43GO:0006353: DNA-templated transcription, termination2.43E-05
44GO:0010206: photosystem II repair5.66E-05
45GO:0045038: protein import into chloroplast thylakoid membrane7.48E-05
46GO:0006418: tRNA aminoacylation for protein translation7.53E-05
47GO:1903426: regulation of reactive oxygen species biosynthetic process9.91E-05
48GO:0010275: NAD(P)H dehydrogenase complex assembly9.91E-05
49GO:0043039: tRNA aminoacylation9.91E-05
50GO:0018026: peptidyl-lysine monomethylation9.91E-05
51GO:0006655: phosphatidylglycerol biosynthetic process1.29E-04
52GO:1901259: chloroplast rRNA processing2.01E-04
53GO:0009793: embryo development ending in seed dormancy2.05E-04
54GO:0010411: xyloglucan metabolic process2.26E-04
55GO:0055114: oxidation-reduction process2.68E-04
56GO:0006518: peptide metabolic process2.85E-04
57GO:0009772: photosynthetic electron transport in photosystem II2.91E-04
58GO:0042255: ribosome assembly3.99E-04
59GO:0048564: photosystem I assembly3.99E-04
60GO:0032502: developmental process4.68E-04
61GO:0016556: mRNA modification5.46E-04
62GO:0015976: carbon utilization8.79E-04
63GO:0006546: glycine catabolic process8.79E-04
64GO:0006183: GTP biosynthetic process8.79E-04
65GO:0016123: xanthophyll biosynthetic process1.29E-03
66GO:0032543: mitochondrial translation1.29E-03
67GO:0031365: N-terminal protein amino acid modification1.29E-03
68GO:0000413: protein peptidyl-prolyl isomerization1.35E-03
69GO:0045037: protein import into chloroplast stroma1.50E-03
70GO:0016024: CDP-diacylglycerol biosynthetic process1.50E-03
71GO:0046520: sphingoid biosynthetic process1.66E-03
72GO:0006824: cobalt ion transport1.66E-03
73GO:0043489: RNA stabilization1.66E-03
74GO:0046166: glyceraldehyde-3-phosphate biosynthetic process1.66E-03
75GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process1.66E-03
76GO:0071588: hydrogen peroxide mediated signaling pathway1.66E-03
77GO:0010729: positive regulation of hydrogen peroxide biosynthetic process1.66E-03
78GO:0006434: seryl-tRNA aminoacylation1.66E-03
79GO:1904966: positive regulation of vitamin E biosynthetic process1.66E-03
80GO:0060627: regulation of vesicle-mediated transport1.66E-03
81GO:0043266: regulation of potassium ion transport1.66E-03
82GO:0000481: maturation of 5S rRNA1.66E-03
83GO:1904964: positive regulation of phytol biosynthetic process1.66E-03
84GO:0042371: vitamin K biosynthetic process1.66E-03
85GO:0043686: co-translational protein modification1.66E-03
86GO:2000021: regulation of ion homeostasis1.66E-03
87GO:0006436: tryptophanyl-tRNA aminoacylation1.66E-03
88GO:0006438: valyl-tRNA aminoacylation1.66E-03
89GO:0043007: maintenance of rDNA1.66E-03
90GO:0009443: pyridoxal 5'-phosphate salvage1.66E-03
91GO:0009767: photosynthetic electron transport chain1.78E-03
92GO:0006006: glucose metabolic process1.78E-03
93GO:0042549: photosystem II stabilization1.79E-03
94GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.79E-03
95GO:0019253: reductive pentose-phosphate cycle2.09E-03
96GO:0010019: chloroplast-nucleus signaling pathway2.38E-03
97GO:0042372: phylloquinone biosynthetic process2.38E-03
98GO:0045454: cell redox homeostasis2.63E-03
99GO:0006636: unsaturated fatty acid biosynthetic process2.81E-03
100GO:0042742: defense response to bacterium2.85E-03
101GO:0071555: cell wall organization2.85E-03
102GO:0009828: plant-type cell wall loosening2.88E-03
103GO:0009645: response to low light intensity stimulus3.06E-03
104GO:0010444: guard mother cell differentiation3.06E-03
105GO:0010196: nonphotochemical quenching3.06E-03
106GO:0042546: cell wall biogenesis3.46E-03
107GO:0007017: microtubule-based process3.67E-03
108GO:0010115: regulation of abscisic acid biosynthetic process3.71E-03
109GO:0006568: tryptophan metabolic process3.71E-03
110GO:0019388: galactose catabolic process3.71E-03
111GO:0034755: iron ion transmembrane transport3.71E-03
112GO:0030388: fructose 1,6-bisphosphate metabolic process3.71E-03
113GO:0070981: L-asparagine biosynthetic process3.71E-03
114GO:2000123: positive regulation of stomatal complex development3.71E-03
115GO:0045717: negative regulation of fatty acid biosynthetic process3.71E-03
116GO:0006695: cholesterol biosynthetic process3.71E-03
117GO:0080148: negative regulation of response to water deprivation3.71E-03
118GO:0080040: positive regulation of cellular response to phosphate starvation3.71E-03
119GO:1902326: positive regulation of chlorophyll biosynthetic process3.71E-03
120GO:0071258: cellular response to gravity3.71E-03
121GO:0006529: asparagine biosynthetic process3.71E-03
122GO:0008616: queuosine biosynthetic process3.71E-03
123GO:0006729: tetrahydrobiopterin biosynthetic process3.71E-03
124GO:2000070: regulation of response to water deprivation3.84E-03
125GO:0016998: cell wall macromolecule catabolic process4.15E-03
126GO:0071482: cellular response to light stimulus4.71E-03
127GO:0009831: plant-type cell wall modification involved in multidimensional cell growth5.24E-03
128GO:0000373: Group II intron splicing5.69E-03
129GO:0009306: protein secretion5.85E-03
130GO:0032504: multicellular organism reproduction6.20E-03
131GO:0006954: inflammatory response6.20E-03
132GO:0019563: glycerol catabolic process6.20E-03
133GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition6.20E-03
134GO:0015840: urea transport6.20E-03
135GO:0051604: protein maturation6.20E-03
136GO:0045493: xylan catabolic process6.20E-03
137GO:0006000: fructose metabolic process6.20E-03
138GO:2001295: malonyl-CoA biosynthetic process6.20E-03
139GO:0016117: carotenoid biosynthetic process6.50E-03
140GO:0009790: embryo development6.52E-03
141GO:0010205: photoinhibition6.76E-03
142GO:1900865: chloroplast RNA modification6.76E-03
143GO:0042335: cuticle development7.20E-03
144GO:0080022: primary root development7.20E-03
145GO:0009409: response to cold7.91E-03
146GO:0006949: syncytium formation7.94E-03
147GO:0016051: carbohydrate biosynthetic process8.31E-03
148GO:0010731: protein glutathionylation9.12E-03
149GO:0006424: glutamyl-tRNA aminoacylation9.12E-03
150GO:0071484: cellular response to light intensity9.12E-03
151GO:0046739: transport of virus in multicellular host9.12E-03
152GO:0009152: purine ribonucleotide biosynthetic process9.12E-03
153GO:0046653: tetrahydrofolate metabolic process9.12E-03
154GO:0009590: detection of gravity9.12E-03
155GO:0010239: chloroplast mRNA processing9.12E-03
156GO:0050482: arachidonic acid secretion9.12E-03
157GO:0043572: plastid fission9.12E-03
158GO:0006241: CTP biosynthetic process9.12E-03
159GO:0055070: copper ion homeostasis9.12E-03
160GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis9.12E-03
161GO:0080170: hydrogen peroxide transmembrane transport9.12E-03
162GO:2001141: regulation of RNA biosynthetic process9.12E-03
163GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity9.12E-03
164GO:0009052: pentose-phosphate shunt, non-oxidative branch9.12E-03
165GO:0009650: UV protection9.12E-03
166GO:0006165: nucleoside diphosphate phosphorylation9.12E-03
167GO:0006228: UTP biosynthetic process9.12E-03
168GO:0009073: aromatic amino acid family biosynthetic process9.22E-03
169GO:0006352: DNA-templated transcription, initiation9.22E-03
170GO:0019684: photosynthesis, light reaction9.22E-03
171GO:0009451: RNA modification9.51E-03
172GO:0019252: starch biosynthetic process9.57E-03
173GO:0006094: gluconeogenesis1.21E-02
174GO:0030007: cellular potassium ion homeostasis1.24E-02
175GO:2000038: regulation of stomatal complex development1.24E-02
176GO:0044206: UMP salvage1.24E-02
177GO:0006749: glutathione metabolic process1.24E-02
178GO:0006021: inositol biosynthetic process1.24E-02
179GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway1.24E-02
180GO:0019464: glycine decarboxylation via glycine cleavage system1.24E-02
181GO:0071483: cellular response to blue light1.24E-02
182GO:0009765: photosynthesis, light harvesting1.24E-02
183GO:0010037: response to carbon dioxide1.24E-02
184GO:0006808: regulation of nitrogen utilization1.24E-02
185GO:2000122: negative regulation of stomatal complex development1.24E-02
186GO:0030104: water homeostasis1.24E-02
187GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.33E-02
188GO:0010020: chloroplast fission1.37E-02
189GO:0090351: seedling development1.54E-02
190GO:0016120: carotene biosynthetic process1.61E-02
191GO:0043097: pyrimidine nucleoside salvage1.61E-02
192GO:0006665: sphingolipid metabolic process1.61E-02
193GO:0006564: L-serine biosynthetic process1.61E-02
194GO:0010236: plastoquinone biosynthetic process1.61E-02
195GO:0010375: stomatal complex patterning1.61E-02
196GO:0009247: glycolipid biosynthetic process1.61E-02
197GO:0034052: positive regulation of plant-type hypersensitive response1.61E-02
198GO:0035434: copper ion transmembrane transport1.61E-02
199GO:0000304: response to singlet oxygen1.61E-02
200GO:0006833: water transport1.73E-02
201GO:0042538: hyperosmotic salinity response1.74E-02
202GO:0009664: plant-type cell wall organization1.74E-02
203GO:0019344: cysteine biosynthetic process1.92E-02
204GO:0042128: nitrate assimilation1.94E-02
205GO:0009826: unidimensional cell growth1.98E-02
206GO:0032973: amino acid export2.01E-02
207GO:0042793: transcription from plastid promoter2.01E-02
208GO:0018258: protein O-linked glycosylation via hydroxyproline2.01E-02
209GO:0010190: cytochrome b6f complex assembly2.01E-02
210GO:0046855: inositol phosphate dephosphorylation2.01E-02
211GO:0009117: nucleotide metabolic process2.01E-02
212GO:0006014: D-ribose metabolic process2.01E-02
213GO:0009972: cytidine deamination2.01E-02
214GO:0016554: cytidine to uridine editing2.01E-02
215GO:0006561: proline biosynthetic process2.01E-02
216GO:0010405: arabinogalactan protein metabolic process2.01E-02
217GO:0006751: glutathione catabolic process2.01E-02
218GO:0006206: pyrimidine nucleobase metabolic process2.01E-02
219GO:0007035: vacuolar acidification2.01E-02
220GO:0006810: transport2.02E-02
221GO:0009768: photosynthesis, light harvesting in photosystem I2.13E-02
222GO:0031408: oxylipin biosynthetic process2.34E-02
223GO:0061077: chaperone-mediated protein folding2.34E-02
224GO:0018298: protein-chromophore linkage2.37E-02
225GO:0048481: plant ovule development2.37E-02
226GO:0009612: response to mechanical stimulus2.44E-02
227GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity2.44E-02
228GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2.44E-02
229GO:0006458: 'de novo' protein folding2.44E-02
230GO:0006694: steroid biosynthetic process2.44E-02
231GO:0048280: vesicle fusion with Golgi apparatus2.44E-02
232GO:0009955: adaxial/abaxial pattern specification2.44E-02
233GO:0010189: vitamin E biosynthetic process2.44E-02
234GO:0009554: megasporogenesis2.44E-02
235GO:0009854: oxidative photosynthetic carbon pathway2.44E-02
236GO:0042026: protein refolding2.44E-02
237GO:0010555: response to mannitol2.44E-02
238GO:0009407: toxin catabolic process2.69E-02
239GO:0009411: response to UV2.80E-02
240GO:0009610: response to symbiotic fungus2.90E-02
241GO:0050829: defense response to Gram-negative bacterium2.90E-02
242GO:0006955: immune response2.90E-02
243GO:0009395: phospholipid catabolic process2.90E-02
244GO:0043090: amino acid import2.90E-02
245GO:0006400: tRNA modification2.90E-02
246GO:0006614: SRP-dependent cotranslational protein targeting to membrane2.90E-02
247GO:0006821: chloride transport2.90E-02
248GO:0080167: response to karrikin3.19E-02
249GO:0009853: photorespiration3.20E-02
250GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.31E-02
251GO:0006508: proteolysis3.35E-02
252GO:0034599: cellular response to oxidative stress3.38E-02
253GO:0006644: phospholipid metabolic process3.39E-02
254GO:0006875: cellular metal ion homeostasis3.39E-02
255GO:0043068: positive regulation of programmed cell death3.39E-02
256GO:0009690: cytokinin metabolic process3.39E-02
257GO:0006605: protein targeting3.39E-02
258GO:0019375: galactolipid biosynthetic process3.39E-02
259GO:0010078: maintenance of root meristem identity3.39E-02
260GO:0045292: mRNA cis splicing, via spliceosome3.39E-02
261GO:0009704: de-etiolation3.39E-02
262GO:0032508: DNA duplex unwinding3.39E-02
263GO:0005978: glycogen biosynthetic process3.39E-02
264GO:0009819: drought recovery3.39E-02
265GO:0009642: response to light intensity3.39E-02
266GO:0008380: RNA splicing3.57E-02
267GO:0034220: ion transmembrane transport3.58E-02
268GO:0030001: metal ion transport3.77E-02
269GO:0010182: sugar mediated signaling pathway3.86E-02
270GO:0009932: cell tip growth3.90E-02
271GO:0006002: fructose 6-phosphate metabolic process3.90E-02
272GO:0015996: chlorophyll catabolic process3.90E-02
273GO:0006526: arginine biosynthetic process3.90E-02
274GO:0007186: G-protein coupled receptor signaling pathway3.90E-02
275GO:0043562: cellular response to nitrogen levels3.90E-02
276GO:0017004: cytochrome complex assembly3.90E-02
277GO:0009808: lignin metabolic process3.90E-02
278GO:0010497: plasmodesmata-mediated intercellular transport3.90E-02
279GO:0009657: plastid organization3.90E-02
280GO:0006631: fatty acid metabolic process3.97E-02
281GO:0009416: response to light stimulus4.17E-02
282GO:0005975: carbohydrate metabolic process4.19E-02
283GO:0080144: amino acid homeostasis4.44E-02
284GO:0034765: regulation of ion transmembrane transport4.44E-02
285GO:0033384: geranyl diphosphate biosynthetic process4.44E-02
286GO:0009051: pentose-phosphate shunt, oxidative branch4.44E-02
287GO:0006754: ATP biosynthetic process4.44E-02
288GO:0048589: developmental growth4.44E-02
289GO:0045337: farnesyl diphosphate biosynthetic process4.44E-02
290GO:0009821: alkaloid biosynthetic process4.44E-02
291GO:0000302: response to reactive oxygen species4.76E-02
292GO:0031425: chloroplast RNA processing5.00E-02
293GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process5.00E-02
294GO:0042761: very long-chain fatty acid biosynthetic process5.00E-02
RankGO TermAdjusted P value
1GO:0004822: isoleucine-tRNA ligase activity0.00E+00
2GO:0008887: glycerate kinase activity0.00E+00
3GO:0045550: geranylgeranyl reductase activity0.00E+00
4GO:0004853: uroporphyrinogen decarboxylase activity0.00E+00
5GO:0048307: ferredoxin-nitrite reductase activity0.00E+00
6GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
7GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
8GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
9GO:0005048: signal sequence binding0.00E+00
10GO:0047889: ferredoxin-nitrate reductase activity0.00E+00
11GO:0050614: delta24-sterol reductase activity0.00E+00
12GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
13GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
14GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
15GO:0050421: nitrite reductase (NO-forming) activity0.00E+00
16GO:0004418: hydroxymethylbilane synthase activity0.00E+00
17GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
18GO:0004823: leucine-tRNA ligase activity0.00E+00
19GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
20GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
21GO:0047513: 1,2-alpha-L-fucosidase activity0.00E+00
22GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
23GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
24GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
25GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
26GO:0015038: glutathione disulfide oxidoreductase activity0.00E+00
27GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity0.00E+00
28GO:0004496: mevalonate kinase activity0.00E+00
29GO:0046408: chlorophyll synthetase activity0.00E+00
30GO:0010301: xanthoxin dehydrogenase activity0.00E+00
31GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
32GO:0015269: calcium-activated potassium channel activity0.00E+00
33GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
34GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding0.00E+00
35GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
36GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
37GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
38GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
39GO:0045435: lycopene epsilon cyclase activity0.00E+00
40GO:0019843: rRNA binding1.17E-23
41GO:0003735: structural constituent of ribosome4.29E-11
42GO:0003755: peptidyl-prolyl cis-trans isomerase activity6.75E-08
43GO:0016851: magnesium chelatase activity7.94E-08
44GO:0051920: peroxiredoxin activity7.77E-06
45GO:0016209: antioxidant activity2.43E-05
46GO:0005528: FK506 binding5.95E-05
47GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity9.91E-05
48GO:0004812: aminoacyl-tRNA ligase activity1.99E-04
49GO:0052689: carboxylic ester hydrolase activity2.55E-04
50GO:0002161: aminoacyl-tRNA editing activity2.85E-04
51GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor2.85E-04
52GO:0016788: hydrolase activity, acting on ester bonds3.18E-04
53GO:0016762: xyloglucan:xyloglucosyl transferase activity4.13E-04
54GO:0004045: aminoacyl-tRNA hydrolase activity8.79E-04
55GO:0016987: sigma factor activity8.79E-04
56GO:0016279: protein-lysine N-methyltransferase activity8.79E-04
57GO:0052793: pectin acetylesterase activity8.79E-04
58GO:0001053: plastid sigma factor activity8.79E-04
59GO:0016798: hydrolase activity, acting on glycosyl bonds1.10E-03
60GO:0003989: acetyl-CoA carboxylase activity1.29E-03
61GO:0003959: NADPH dehydrogenase activity1.29E-03
62GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity1.66E-03
63GO:0042586: peptide deformylase activity1.66E-03
64GO:0047560: 3-dehydrosphinganine reductase activity1.66E-03
65GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity1.66E-03
66GO:0045485: omega-6 fatty acid desaturase activity1.66E-03
67GO:0009374: biotin binding1.66E-03
68GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity1.66E-03
69GO:0000170: sphingosine hydroxylase activity1.66E-03
70GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity1.66E-03
71GO:0015200: methylammonium transmembrane transporter activity1.66E-03
72GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity1.66E-03
73GO:0030794: (S)-coclaurine-N-methyltransferase activity1.66E-03
74GO:0004425: indole-3-glycerol-phosphate synthase activity1.66E-03
75GO:0004560: alpha-L-fucosidase activity1.66E-03
76GO:0004807: triose-phosphate isomerase activity1.66E-03
77GO:0015088: copper uptake transmembrane transporter activity1.66E-03
78GO:0004832: valine-tRNA ligase activity1.66E-03
79GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity1.66E-03
80GO:0004830: tryptophan-tRNA ligase activity1.66E-03
81GO:0042834: peptidoglycan binding1.66E-03
82GO:0004828: serine-tRNA ligase activity1.66E-03
83GO:0004328: formamidase activity1.66E-03
84GO:0080132: fatty acid alpha-hydroxylase activity1.66E-03
85GO:0004831: tyrosine-tRNA ligase activity1.66E-03
86GO:0004655: porphobilinogen synthase activity1.66E-03
87GO:0010347: L-galactose-1-phosphate phosphatase activity1.66E-03
88GO:0004071: aspartate-ammonia ligase activity1.66E-03
89GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity1.66E-03
90GO:0031072: heat shock protein binding1.78E-03
91GO:0004130: cytochrome-c peroxidase activity1.79E-03
92GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity2.38E-03
93GO:0005200: structural constituent of cytoskeleton3.17E-03
94GO:0016491: oxidoreductase activity3.50E-03
95GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity3.71E-03
96GO:0051537: 2 iron, 2 sulfur cluster binding3.71E-03
97GO:0009977: proton motive force dependent protein transmembrane transporter activity3.71E-03
98GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity3.71E-03
99GO:0004617: phosphoglycerate dehydrogenase activity3.71E-03
100GO:0004614: phosphoglucomutase activity3.71E-03
101GO:0003938: IMP dehydrogenase activity3.71E-03
102GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase3.71E-03
103GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity3.71E-03
104GO:0008967: phosphoglycolate phosphatase activity3.71E-03
105GO:0004047: aminomethyltransferase activity3.71E-03
106GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity3.71E-03
107GO:0052832: inositol monophosphate 3-phosphatase activity3.71E-03
108GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity3.71E-03
109GO:0008479: queuine tRNA-ribosyltransferase activity3.71E-03
110GO:0008883: glutamyl-tRNA reductase activity3.71E-03
111GO:0042284: sphingolipid delta-4 desaturase activity3.71E-03
112GO:0008934: inositol monophosphate 1-phosphatase activity3.71E-03
113GO:0042389: omega-3 fatty acid desaturase activity3.71E-03
114GO:0052833: inositol monophosphate 4-phosphatase activity3.71E-03
115GO:0003839: gamma-glutamylcyclotransferase activity3.71E-03
116GO:0080097: L-tryptophan:pyruvate aminotransferase activity3.71E-03
117GO:0016630: protochlorophyllide reductase activity3.71E-03
118GO:0004326: tetrahydrofolylpolyglutamate synthase activity3.71E-03
119GO:0004033: aldo-keto reductase (NADP) activity3.84E-03
120GO:0003723: RNA binding3.92E-03
121GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water4.71E-03
122GO:0008236: serine-type peptidase activity5.32E-03
123GO:0003727: single-stranded RNA binding5.85E-03
124GO:0004075: biotin carboxylase activity6.20E-03
125GO:0010277: chlorophyllide a oxygenase [overall] activity6.20E-03
126GO:0004751: ribose-5-phosphate isomerase activity6.20E-03
127GO:0045174: glutathione dehydrogenase (ascorbate) activity6.20E-03
128GO:0016531: copper chaperone activity6.20E-03
129GO:0070330: aromatase activity6.20E-03
130GO:0030267: glyoxylate reductase (NADP) activity6.20E-03
131GO:0019829: cation-transporting ATPase activity6.20E-03
132GO:0017150: tRNA dihydrouridine synthase activity6.20E-03
133GO:0050734: hydroxycinnamoyltransferase activity6.20E-03
134GO:0016742: hydroxymethyl-, formyl- and related transferase activity6.20E-03
135GO:0070402: NADPH binding6.20E-03
136GO:0008864: formyltetrahydrofolate deformylase activity6.20E-03
137GO:0004148: dihydrolipoyl dehydrogenase activity6.20E-03
138GO:0005504: fatty acid binding6.20E-03
139GO:0004222: metalloendopeptidase activity6.70E-03
140GO:0005381: iron ion transmembrane transporter activity6.76E-03
141GO:0004601: peroxidase activity7.77E-03
142GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds7.97E-03
143GO:0035250: UDP-galactosyltransferase activity9.12E-03
144GO:0008508: bile acid:sodium symporter activity9.12E-03
145GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor9.12E-03
146GO:0001872: (1->3)-beta-D-glucan binding9.12E-03
147GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides9.12E-03
148GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity9.12E-03
149GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity9.12E-03
150GO:0004375: glycine dehydrogenase (decarboxylating) activity9.12E-03
151GO:0004550: nucleoside diphosphate kinase activity9.12E-03
152GO:0043023: ribosomal large subunit binding9.12E-03
153GO:0035529: NADH pyrophosphatase activity9.12E-03
154GO:0008097: 5S rRNA binding9.12E-03
155GO:0019901: protein kinase binding9.57E-03
156GO:0005509: calcium ion binding1.01E-02
157GO:0004364: glutathione transferase activity1.16E-02
158GO:0004022: alcohol dehydrogenase (NAD) activity1.21E-02
159GO:0004089: carbonate dehydratase activity1.21E-02
160GO:0043495: protein anchor1.24E-02
161GO:0009044: xylan 1,4-beta-xylosidase activity1.24E-02
162GO:0004845: uracil phosphoribosyltransferase activity1.24E-02
163GO:0004345: glucose-6-phosphate dehydrogenase activity1.24E-02
164GO:0016836: hydro-lyase activity1.24E-02
165GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity1.24E-02
166GO:0046556: alpha-L-arabinofuranosidase activity1.24E-02
167GO:1990137: plant seed peroxidase activity1.24E-02
168GO:0015204: urea transmembrane transporter activity1.24E-02
169GO:0004659: prenyltransferase activity1.24E-02
170GO:0045430: chalcone isomerase activity1.24E-02
171GO:0008266: poly(U) RNA binding1.37E-02
172GO:0004519: endonuclease activity1.40E-02
173GO:0008237: metallopeptidase activity1.45E-02
174GO:0016722: oxidoreductase activity, oxidizing metal ions1.45E-02
175GO:0016597: amino acid binding1.57E-02
176GO:0004040: amidase activity1.61E-02
177GO:0030414: peptidase inhibitor activity1.61E-02
178GO:0004623: phospholipase A2 activity1.61E-02
179GO:0018685: alkane 1-monooxygenase activity1.61E-02
180GO:0009922: fatty acid elongase activity1.61E-02
181GO:0016846: carbon-sulfur lyase activity1.61E-02
182GO:0016773: phosphotransferase activity, alcohol group as acceptor1.61E-02
183GO:0051287: NAD binding1.65E-02
184GO:0015250: water channel activity1.69E-02
185GO:0031409: pigment binding1.73E-02
186GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.73E-02
187GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.73E-02
188GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.73E-02
189GO:0016168: chlorophyll binding1.81E-02
190GO:0004366: glycerol-3-phosphate O-acyltransferase activity2.01E-02
191GO:0015271: outward rectifier potassium channel activity2.01E-02
192GO:0042578: phosphoric ester hydrolase activity2.01E-02
193GO:0004605: phosphatidate cytidylyltransferase activity2.01E-02
194GO:0016208: AMP binding2.01E-02
195GO:0080030: methyl indole-3-acetate esterase activity2.01E-02
196GO:0016462: pyrophosphatase activity2.01E-02
197GO:1990714: hydroxyproline O-galactosyltransferase activity2.01E-02
198GO:0016688: L-ascorbate peroxidase activity2.01E-02
199GO:0008200: ion channel inhibitor activity2.01E-02
200GO:0008519: ammonium transmembrane transporter activity2.01E-02
201GO:0005247: voltage-gated chloride channel activity2.01E-02
202GO:0003690: double-stranded DNA binding2.04E-02
203GO:0005507: copper ion binding2.13E-02
204GO:0004176: ATP-dependent peptidase activity2.34E-02
205GO:0004849: uridine kinase activity2.44E-02
206GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity2.44E-02
207GO:0004124: cysteine synthase activity2.44E-02
208GO:0004126: cytidine deaminase activity2.44E-02
209GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.44E-02
210GO:0004747: ribokinase activity2.44E-02
211GO:0051753: mannan synthase activity2.44E-02
212GO:0030570: pectate lyase activity2.80E-02
213GO:0003924: GTPase activity2.80E-02
214GO:0019899: enzyme binding2.90E-02
215GO:0008235: metalloexopeptidase activity2.90E-02
216GO:0043295: glutathione binding2.90E-02
217GO:0003756: protein disulfide isomerase activity3.05E-02
218GO:0009055: electron carrier activity3.23E-02
219GO:0051082: unfolded protein binding3.29E-02
220GO:0008865: fructokinase activity3.39E-02
221GO:0008312: 7S RNA binding3.39E-02
222GO:0004034: aldose 1-epimerase activity3.39E-02
223GO:0050661: NADP binding3.77E-02
224GO:0005267: potassium channel activity3.90E-02
225GO:0005375: copper ion transmembrane transporter activity3.90E-02
226GO:0016758: transferase activity, transferring hexosyl groups4.39E-02
227GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors4.44E-02
228GO:0004337: geranyltranstransferase activity4.44E-02
229GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism4.44E-02
230GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4.73E-02
231GO:0016844: strictosidine synthase activity5.00E-02
RankGO TermAdjusted P value
1GO:0044391: ribosomal subunit0.00E+00
2GO:0009515: granal stacked thylakoid0.00E+00
3GO:0009344: nitrite reductase complex [NAD(P)H]0.00E+00
4GO:0005835: fatty acid synthase complex0.00E+00
5GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex0.00E+00
6GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
7GO:0009507: chloroplast2.89E-135
8GO:0009570: chloroplast stroma4.72E-89
9GO:0009941: chloroplast envelope1.02E-69
10GO:0009535: chloroplast thylakoid membrane4.21E-58
11GO:0009579: thylakoid1.30E-41
12GO:0009534: chloroplast thylakoid2.87E-40
13GO:0009543: chloroplast thylakoid lumen8.02E-31
14GO:0031977: thylakoid lumen6.81E-22
15GO:0005840: ribosome2.03E-12
16GO:0009654: photosystem II oxygen evolving complex8.39E-12
17GO:0048046: apoplast4.83E-09
18GO:0009706: chloroplast inner membrane9.59E-09
19GO:0019898: extrinsic component of membrane1.47E-08
20GO:0031969: chloroplast membrane4.18E-08
21GO:0009505: plant-type cell wall9.24E-07
22GO:0031225: anchored component of membrane1.36E-06
23GO:0010007: magnesium chelatase complex3.31E-06
24GO:0046658: anchored component of plasma membrane8.40E-06
25GO:0009536: plastid1.06E-05
26GO:0005618: cell wall1.43E-05
27GO:0030095: chloroplast photosystem II2.63E-05
28GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)5.66E-05
29GO:0016020: membrane7.85E-05
30GO:0009295: nucleoid1.15E-04
31GO:0000311: plastid large ribosomal subunit1.88E-04
32GO:0009508: plastid chromosome2.38E-04
33GO:0009533: chloroplast stromal thylakoid2.91E-04
34GO:0042651: thylakoid membrane6.01E-04
35GO:0010319: stromule6.63E-04
36GO:0045298: tubulin complex6.75E-04
37GO:0009923: fatty acid elongase complex1.66E-03
38GO:0009782: photosystem I antenna complex1.66E-03
39GO:0043674: columella1.66E-03
40GO:0009547: plastid ribosome1.66E-03
41GO:0015934: large ribosomal subunit1.72E-03
42GO:0000312: plastid small ribosomal subunit2.09E-03
43GO:0042807: central vacuole3.06E-03
44GO:0000427: plastid-encoded plastid RNA polymerase complex3.71E-03
45GO:0042170: plastid membrane3.71E-03
46GO:0080085: signal recognition particle, chloroplast targeting3.71E-03
47GO:0030529: intracellular ribonucleoprotein complex3.80E-03
48GO:0009509: chromoplast6.20E-03
49GO:0009317: acetyl-CoA carboxylase complex6.20E-03
50GO:0009528: plastid inner membrane6.20E-03
51GO:0033281: TAT protein transport complex6.20E-03
52GO:0005960: glycine cleavage complex9.12E-03
53GO:0042646: plastid nucleoid9.12E-03
54GO:0032040: small-subunit processome1.06E-02
55GO:0009526: plastid envelope1.24E-02
56GO:0009527: plastid outer membrane1.24E-02
57GO:0031897: Tic complex1.24E-02
58GO:0010287: plastoglobule1.39E-02
59GO:0030076: light-harvesting complex1.54E-02
60GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain1.61E-02
61GO:0055035: plastid thylakoid membrane1.61E-02
62GO:0005576: extracellular region1.71E-02
63GO:0043234: protein complex1.73E-02
64GO:0034707: chloride channel complex2.01E-02
65GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)2.01E-02
66GO:0009532: plastid stroma2.34E-02
67GO:0015935: small ribosomal subunit2.34E-02
68GO:0009707: chloroplast outer membrane2.37E-02
69GO:0016363: nuclear matrix2.44E-02
70GO:0012507: ER to Golgi transport vesicle membrane3.39E-02
71GO:0043231: intracellular membrane-bounded organelle3.42E-02
72GO:0009539: photosystem II reaction center3.90E-02
73GO:0005786: signal recognition particle, endoplasmic reticulum targeting3.90E-02
74GO:0005811: lipid particle3.90E-02
75GO:0000326: protein storage vacuole3.90E-02
76GO:0005763: mitochondrial small ribosomal subunit4.44E-02
77GO:0009523: photosystem II4.45E-02
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Gene type



Gene DE type