Gene: AT3G56880
     

Gene description


TAIR ID: AT3G56880

Short description: VQ motif-containing protein

Pathogen responsiveness: -0.50

General responsiveness: 0.02

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G378442  

Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


nucleus


GO molecular function


molecular_function


Protein domain


PfamPF05678, VQ motif

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G15270, AT2G47070, AT5G11260, AT1G24260, AT1G53160

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


10 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min1.515.28E-07
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min1.565.08E-07
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.864.53E-08
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min1.791.40E-04
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h1.981.40E-08
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h1.782.42E-08
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h2.133.05E-10
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h1.782.39E-02
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min2.221.39E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min1.741.36E-02






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