gene detail

Gene description

TAIR ID: AT3G54360

Short description: zinc ion binding

Pathogen responsiveness: -2.19

General responsiveness: -0.68

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G049672

Wheat:

TA.17892.1.S1_AT

GO biological process

maintenance of DNA methylation, positive regulation of catalase activity, regulation of methylation-dependent chromatin silencing, protein ubiquitination

GO cellular component

cytosol, nuclear heterochromatin, nucleus

GO molecular function

ubiquitin protein ligase activity, metal ion binding

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 5

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.57	8.56E-03