co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G54360

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0050793: regulation of developmental process	1.18E-05
2	GO:0000256: allantoin catabolic process	1.18E-05
3	GO:0010136: ureide catabolic process	2.19E-05
4	GO:0045165: cell fate commitment	2.19E-05
5	GO:0006145: purine nucleobase catabolic process	3.41E-05
6	GO:0009957: epidermal cell fate specification	6.40E-05
7	GO:0000060: protein import into nucleus, translocation	8.11E-05
8	GO:0010189: vitamin E biosynthetic process	9.94E-05
9	GO:0010077: maintenance of inflorescence meristem identity	9.94E-05
10	GO:0032880: regulation of protein localization	1.19E-04
11	GO:0010206: photosystem II repair	1.83E-04
12	GO:0009723: response to ethylene	2.85E-04
13	GO:0010026: trichome differentiation	4.35E-04
14	GO:0009306: protein secretion	5.49E-04
15	GO:0008654: phospholipid biosynthetic process	6.99E-04
16	GO:0030163: protein catabolic process	7.94E-04
17	GO:0006904: vesicle docking involved in exocytosis	8.59E-04
18	GO:0009911: positive regulation of flower development	9.24E-04
19	GO:0006950: response to stress	1.03E-03
20	GO:0000165: MAPK cascade	1.71E-03
21	GO:0009624: response to nematode	2.32E-03
22	GO:0009739: response to gibberellin	3.62E-03
23	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	4.29E-03
24	GO:0016567: protein ubiquitination	4.52E-03
25	GO:0006508: proteolysis	4.57E-03
26	GO:0006970: response to osmotic stress	4.75E-03
27	GO:0009908: flower development	9.53E-03
28	GO:0009735: response to cytokinin	9.61E-03
29	GO:0035556: intracellular signal transduction	1.06E-02
30	GO:0045893: positive regulation of transcription, DNA-templated	1.13E-02
31	GO:0006511: ubiquitin-dependent protein catabolic process	1.27E-02
32	GO:0030154: cell differentiation	1.79E-02
33	GO:0009733: response to auxin	1.83E-02
34	GO:0009409: response to cold	2.09E-02
35	GO:0006810: transport	2.22E-02
36	GO:0007275: multicellular organism development	2.73E-02
37	GO:0016310: phosphorylation	3.20E-02
38	GO:0009651: response to salt stress	4.00E-02

Rank	GO Term	Adjusted P value
1	GO:0010276: phytol kinase activity	0.00E+00
2	GO:0004848: ureidoglycolate hydrolase activity	2.19E-05
3	GO:0004605: phosphatidate cytidylyltransferase activity	8.11E-05
4	GO:0008134: transcription factor binding	4.07E-04
5	GO:0005515: protein binding	6.14E-04
6	GO:0008237: metallopeptidase activity	8.59E-04
7	GO:0008236: serine-type peptidase activity	1.06E-03
8	GO:0031625: ubiquitin protein ligase binding	1.96E-03
9	GO:0004842: ubiquitin-protein transferase activity	2.08E-03
10	GO:0004252: serine-type endopeptidase activity	2.90E-03
11	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.95E-03
12	GO:0016787: hydrolase activity	3.20E-03
13	GO:0061630: ubiquitin protein ligase activity	5.42E-03
14	GO:0042803: protein homodimerization activity	6.12E-03
15	GO:0003924: GTPase activity	6.85E-03
16	GO:0016887: ATPase activity	9.30E-03
17	GO:0000166: nucleotide binding	1.02E-02
18	GO:0005525: GTP binding	1.45E-02
19	GO:0005215: transporter activity	1.81E-02
20	GO:0046983: protein dimerization activity	2.07E-02
21	GO:0004672: protein kinase activity	2.22E-02
22	GO:0005524: ATP binding	3.34E-02

Rank	GO Term	Adjusted P value
1	GO:0031977: thylakoid lumen	1.43E-03
2	GO:0009543: chloroplast thylakoid lumen	2.70E-03
3	GO:0031969: chloroplast membrane	5.24E-03
4	GO:0009579: thylakoid	1.16E-02
5	GO:0009534: chloroplast thylakoid	1.17E-02
6	GO:0000139: Golgi membrane	2.09E-02
7	GO:0005737: cytoplasm	2.28E-02
8	GO:0009535: chloroplast thylakoid membrane	3.00E-02