Gene: AT3G53600
     


Gene description


TAIR ID: AT3G53600

Short description: C2H2-type zinc finger family protein

Pathogen responsiveness: 0.97

General responsiveness: 0.73

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, cellular response to water deprivation, response to chitin


GO cellular component


nucleus


GO molecular function


nucleic acid binding, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF13912, C2H2-type zinc finger
SMARTSM00355, ZnF_C2H2

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G07100, AT4G18770, AT5G22570, AT2G46130

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


27 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h2.326.84E-03
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h2.751.25E-03
GSE17464Laer, controlLaer, Flg22 1 h2.991.10E-04
GSE17464Laer, controlLaer, Flg22 2 h3.372.61E-05
GSE17464Penta, controlPenta, PstDC3000 12 h-1.832.05E-02
GSE17464Penta, controlPenta, Flg22 2 h3.116.03E-05
GSE17464Penta, controlPenta, Flg22 2 h3.391.98E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.024.37E-06
GSE2169Col, rre1, waterCol, rre1, chitin 30 min1.821.28E-05
GSE2169Col, rre2, waterCol, rre2, chitin 30 min2.421.62E-07
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.754.73E-05
GSE21920Col, WT, mockCol, WT, Pto HopZ1a C216aA 6 h2.107.05E-05
GSE21920Col, ulp1, mockCol, ulp1, Pto 6 h1.812.47E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-3.147.40E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-3.965.09E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-1.813.60E-02
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d4.601.81E-10
GSE37269St0, WT, controlSt0, WT, TEV 21 d1.621.17E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.559.09E-08
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h4.142.34E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h1.762.76E-03
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h1.693.44E-09
GSE5615Col, WT, GST 1 hCol, WT, GST+NPP1 1 h2.525.81E-05
GSE5615Col, WT, water 1 hCol, WT, Flg22 1 h2.708.33E-06
GSE5615Col, WT, water 1 hCol, WT, HrpZ 1 h3.128.05E-07
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h2.471.95E-02
GSE6176Col, WT, control 4 hCol, WT, PstDC3000 AvrRpm1 4 h3.011.36E-02






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