gene detail

Gene description

TAIR ID: AT3G53560

Short description: Tetratricopeptide repeat (TPR)-like superfamily protein

Pathogen responsiveness: -1.45

General responsiveness: 0.58

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

chloroplast thylakoid lumen, chloroplast thylakoid membrane, chloroplast envelope, chloroplast, plastid

GO molecular function

unkown

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G24050, AT5G41315, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.39	3.44E-08
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.21	4.06E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.58	1.77E-03