Gene: AT3G53410
     

Gene description


TAIR ID: AT3G53410

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -2.25

General responsiveness: -2.61

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


protein ubiquitination


GO cellular component


cytoplasm


GO molecular function


metal ion binding, ubiquitin-protein transferase activity


Protein domain


PfamPF13920, Zinc finger, C3HC4 type (RING finger)
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G13450

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.688.99E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.642.30E-08






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