Gene: AT3G50890
     

Gene description


TAIR ID: AT3G50890

Short description: homeobox protein 28

Pathogen responsiveness: -2.15

General responsiveness: -2.05

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, transcription


GO cellular component


nucleus


GO molecular function


protein binding, transcription factor activity, sequence-specific DNA binding, metal ion binding


Protein domain


PfamPF04770, ZF-HD protein dimerisation region

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 10 (Top20%)

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.844.55E-06
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.671.58E-05
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.371.70E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.562.40E-02
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.531.12E-05






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