gene detail

Gene description

TAIR ID: AT3G49720

No short description

Pathogen responsiveness: -1.20

General responsiveness: -1.88

Orthologous

Rice:

OS01G0144000

Maize:

GRMZM2G011031

Wheat: No orthologous gene

GO biological process

growth, pectin biosynthetic process

GO cellular component

Golgi membrane, vacuolar membrane, Golgi apparatus, chloroplast thylakoid membrane, endosome, trans-Golgi network, plasma membrane, integral component of membrane, membrane

GO molecular function

molecular_function

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

10 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.54	1.62E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.61	4.92E-06
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.54	1.33E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.92	1.73E-07
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.70	7.65E-11
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.94	3.59E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.76	1.16E-04
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-2.08	4.08E-19
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.54	2.11E-12
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.55	9.24E-13