GO Enrichment Analysis of Co-expressed Genes with
AT3G49720
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015822: ornithine transport | 0.00E+00 |
| 2 | GO:0035998: 7,8-dihydroneopterin 3'-triphosphate biosynthetic process | 0.00E+00 |
| 3 | GO:0080167: response to karrikin | 8.85E-08 |
| 4 | GO:0051555: flavonol biosynthetic process | 3.67E-05 |
| 5 | GO:0019605: butyrate metabolic process | 4.31E-05 |
| 6 | GO:0006083: acetate metabolic process | 4.31E-05 |
| 7 | GO:0048438: floral whorl development | 4.31E-05 |
| 8 | GO:0000066: mitochondrial ornithine transport | 4.31E-05 |
| 9 | GO:1901537: positive regulation of DNA demethylation | 4.31E-05 |
| 10 | GO:0031539: positive regulation of anthocyanin metabolic process | 4.31E-05 |
| 11 | GO:0019388: galactose catabolic process | 1.07E-04 |
| 12 | GO:0010220: positive regulation of vernalization response | 1.07E-04 |
| 13 | GO:1900386: positive regulation of flavonol biosynthetic process | 1.07E-04 |
| 14 | GO:0006729: tetrahydrobiopterin biosynthetic process | 1.07E-04 |
| 15 | GO:0006152: purine nucleoside catabolic process | 1.07E-04 |
| 16 | GO:0007584: response to nutrient | 1.07E-04 |
| 17 | GO:0006651: diacylglycerol biosynthetic process | 1.84E-04 |
| 18 | GO:0045489: pectin biosynthetic process | 2.12E-04 |
| 19 | GO:0009590: detection of gravity | 2.70E-04 |
| 20 | GO:0009743: response to carbohydrate | 2.70E-04 |
| 21 | GO:0009963: positive regulation of flavonoid biosynthetic process | 2.70E-04 |
| 22 | GO:0006097: glyoxylate cycle | 4.63E-04 |
| 23 | GO:0009813: flavonoid biosynthetic process | 5.22E-04 |
| 24 | GO:0009643: photosynthetic acclimation | 5.67E-04 |
| 25 | GO:0070814: hydrogen sulfide biosynthetic process | 5.67E-04 |
| 26 | GO:0000060: protein import into nucleus, translocation | 5.67E-04 |
| 27 | GO:0046855: inositol phosphate dephosphorylation | 5.67E-04 |
| 28 | GO:0010076: maintenance of floral meristem identity | 6.76E-04 |
| 29 | GO:0017148: negative regulation of translation | 6.76E-04 |
| 30 | GO:0046654: tetrahydrofolate biosynthetic process | 6.76E-04 |
| 31 | GO:0010077: maintenance of inflorescence meristem identity | 6.76E-04 |
| 32 | GO:0000105: histidine biosynthetic process | 9.08E-04 |
| 33 | GO:0052543: callose deposition in cell wall | 9.08E-04 |
| 34 | GO:0005978: glycogen biosynthetic process | 9.08E-04 |
| 35 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 9.08E-04 |
| 36 | GO:0044030: regulation of DNA methylation | 1.03E-03 |
| 37 | GO:0010099: regulation of photomorphogenesis | 1.03E-03 |
| 38 | GO:0022900: electron transport chain | 1.03E-03 |
| 39 | GO:0048193: Golgi vesicle transport | 1.03E-03 |
| 40 | GO:0010224: response to UV-B | 1.09E-03 |
| 41 | GO:0009056: catabolic process | 1.16E-03 |
| 42 | GO:0000103: sulfate assimilation | 1.43E-03 |
| 43 | GO:0009970: cellular response to sulfate starvation | 1.43E-03 |
| 44 | GO:0000272: polysaccharide catabolic process | 1.57E-03 |
| 45 | GO:0048229: gametophyte development | 1.57E-03 |
| 46 | GO:0046856: phosphatidylinositol dephosphorylation | 1.57E-03 |
| 47 | GO:0010582: floral meristem determinacy | 1.72E-03 |
| 48 | GO:0006006: glucose metabolic process | 1.87E-03 |
| 49 | GO:0010020: chloroplast fission | 2.03E-03 |
| 50 | GO:0042753: positive regulation of circadian rhythm | 2.36E-03 |
| 51 | GO:0010017: red or far-red light signaling pathway | 3.06E-03 |
| 52 | GO:0000271: polysaccharide biosynthetic process | 3.82E-03 |
| 53 | GO:0010087: phloem or xylem histogenesis | 3.82E-03 |
| 54 | GO:0009958: positive gravitropism | 4.02E-03 |
| 55 | GO:0010182: sugar mediated signaling pathway | 4.02E-03 |
| 56 | GO:0006342: chromatin silencing | 4.02E-03 |
| 57 | GO:0019252: starch biosynthetic process | 4.43E-03 |
| 58 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 4.64E-03 |
| 59 | GO:0071555: cell wall organization | 4.79E-03 |
| 60 | GO:0009630: gravitropism | 4.86E-03 |
| 61 | GO:0010252: auxin homeostasis | 5.30E-03 |
| 62 | GO:0010218: response to far red light | 7.69E-03 |
| 63 | GO:0016051: carbohydrate biosynthetic process | 8.47E-03 |
| 64 | GO:0009637: response to blue light | 8.47E-03 |
| 65 | GO:0006839: mitochondrial transport | 9.28E-03 |
| 66 | GO:0010114: response to red light | 1.01E-02 |
| 67 | GO:0009640: photomorphogenesis | 1.01E-02 |
| 68 | GO:0042546: cell wall biogenesis | 1.04E-02 |
| 69 | GO:0000165: MAPK cascade | 1.16E-02 |
| 70 | GO:0009846: pollen germination | 1.19E-02 |
| 71 | GO:0009585: red, far-red light phototransduction | 1.25E-02 |
| 72 | GO:0009909: regulation of flower development | 1.34E-02 |
| 73 | GO:0045893: positive regulation of transcription, DNA-templated | 1.45E-02 |
| 74 | GO:0009740: gibberellic acid mediated signaling pathway | 1.54E-02 |
| 75 | GO:0009058: biosynthetic process | 1.95E-02 |
| 76 | GO:0009739: response to gibberellin | 2.56E-02 |
| 77 | GO:0010468: regulation of gene expression | 2.68E-02 |
| 78 | GO:0030154: cell differentiation | 2.78E-02 |
| 79 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 3.05E-02 |
| 80 | GO:0005975: carbohydrate metabolic process | 3.87E-02 |
| 81 | GO:0016042: lipid catabolic process | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003934: GTP cyclohydrolase I activity | 0.00E+00 |
| 2 | GO:0047974: guanosine deaminase activity | 0.00E+00 |
| 3 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 4 | GO:0046982: protein heterodimerization activity | 3.46E-05 |
| 5 | GO:0047760: butyrate-CoA ligase activity | 4.31E-05 |
| 6 | GO:0045486: naringenin 3-dioxygenase activity | 4.31E-05 |
| 7 | GO:0004400: histidinol-phosphate transaminase activity | 4.31E-05 |
| 8 | GO:0003987: acetate-CoA ligase activity | 4.31E-05 |
| 9 | GO:0010313: phytochrome binding | 4.31E-05 |
| 10 | GO:0004614: phosphoglucomutase activity | 1.07E-04 |
| 11 | GO:0004566: beta-glucuronidase activity | 1.07E-04 |
| 12 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.07E-04 |
| 13 | GO:0000064: L-ornithine transmembrane transporter activity | 1.07E-04 |
| 14 | GO:0048531: beta-1,3-galactosyltransferase activity | 1.07E-04 |
| 15 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 1.84E-04 |
| 16 | GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity | 1.84E-04 |
| 17 | GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity | 2.70E-04 |
| 18 | GO:0001872: (1->3)-beta-D-glucan binding | 2.70E-04 |
| 19 | GO:0048027: mRNA 5'-UTR binding | 2.70E-04 |
| 20 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 2.70E-04 |
| 21 | GO:0045430: chalcone isomerase activity | 3.64E-04 |
| 22 | GO:0045431: flavonol synthase activity | 4.63E-04 |
| 23 | GO:0016208: AMP binding | 5.67E-04 |
| 24 | GO:0102229: amylopectin maltohydrolase activity | 5.67E-04 |
| 25 | GO:0008195: phosphatidate phosphatase activity | 6.76E-04 |
| 26 | GO:0016161: beta-amylase activity | 6.76E-04 |
| 27 | GO:0019899: enzyme binding | 7.90E-04 |
| 28 | GO:0008327: methyl-CpG binding | 1.57E-03 |
| 29 | GO:0016758: transferase activity, transferring hexosyl groups | 1.79E-03 |
| 30 | GO:0031072: heat shock protein binding | 1.87E-03 |
| 31 | GO:0004175: endopeptidase activity | 2.03E-03 |
| 32 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.09E-03 |
| 33 | GO:0031418: L-ascorbic acid binding | 2.52E-03 |
| 34 | GO:0008194: UDP-glycosyltransferase activity | 2.82E-03 |
| 35 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 3.06E-03 |
| 36 | GO:0004518: nuclease activity | 4.86E-03 |
| 37 | GO:0052689: carboxylic ester hydrolase activity | 5.31E-03 |
| 38 | GO:0003677: DNA binding | 5.41E-03 |
| 39 | GO:0016757: transferase activity, transferring glycosyl groups | 5.47E-03 |
| 40 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 6.69E-03 |
| 41 | GO:0030247: polysaccharide binding | 6.69E-03 |
| 42 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.07E-02 |
| 43 | GO:0016787: hydrolase activity | 1.26E-02 |
| 44 | GO:0003690: double-stranded DNA binding | 1.28E-02 |
| 45 | GO:0004650: polygalacturonase activity | 1.50E-02 |
| 46 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.50E-02 |
| 47 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.50E-02 |
| 48 | GO:0051082: unfolded protein binding | 1.60E-02 |
| 49 | GO:0016829: lyase activity | 1.99E-02 |
| 50 | GO:0000287: magnesium ion binding | 3.18E-02 |
| 51 | GO:0016788: hydrolase activity, acting on ester bonds | 3.27E-02 |
| 52 | GO:0008233: peptidase activity | 3.71E-02 |
| 53 | GO:0043565: sequence-specific DNA binding | 3.76E-02 |
| 54 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 4.27E-02 |
| 55 | GO:0042803: protein homodimerization activity | 4.41E-02 |
| 56 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000786: nucleosome | 2.82E-05 |
| 2 | GO:0010369: chromocenter | 6.76E-04 |
| 3 | GO:0005765: lysosomal membrane | 1.57E-03 |
| 4 | GO:0000790: nuclear chromatin | 3.63E-03 |
| 5 | GO:0009570: chloroplast stroma | 3.98E-03 |
| 6 | GO:0010319: stromule | 5.52E-03 |
| 7 | GO:0000139: Golgi membrane | 7.04E-03 |
| 8 | GO:0009707: chloroplast outer membrane | 7.19E-03 |
| 9 | GO:0031225: anchored component of membrane | 1.97E-02 |
| 10 | GO:0009507: chloroplast | 2.12E-02 |
| 11 | GO:0005794: Golgi apparatus | 2.26E-02 |
| 12 | GO:0046658: anchored component of plasma membrane | 2.88E-02 |
| 13 | GO:0009536: plastid | 3.13E-02 |
| 14 | GO:0009505: plant-type cell wall | 3.20E-02 |
| 15 | GO:0009941: chloroplast envelope | 3.39E-02 |
| 16 | GO:0005743: mitochondrial inner membrane | 4.71E-02 |