Gene: AT3G48830
     

Gene description


TAIR ID: AT3G48830

Short description: polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein

Pathogen responsiveness: -2.03

General responsiveness: -4.18

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


RNA processing


GO cellular component


mitochondrion, plasmodesma


GO molecular function


polynucleotide adenylyltransferase activity


Protein domain


PfamPF12627, Probable RNA and SrmB- binding site of polymerase A
PfamPF01743, Poly A polymerase head domain
PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMARTSM00360, RRM

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G51600, AT5G11260, AT5G49450

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h-3.214.73E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-3.541.14E-03
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h-2.472.22E-02






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