gene detail

Gene description

TAIR ID: AT3G48250

Short description: Pentatricopeptide repeat (PPR) superfamily protein

Pathogen responsiveness: -2.81

General responsiveness: -1.92

Orthologous

Rice: No orthologous gene

Maize:

GRMZM5G838388

Wheat: No orthologous gene

GO biological process

RNA splicing, RNA modification

GO cellular component

mitochondrion, chloroplast

GO molecular function

endonuclease activity, RNA binding

Protein domain

Pfam	PF01535, PPR repeat
Pfam	PF13041, PPR repeat family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.59	3.12E-02