Gene: AT3G47820
     

Gene description


TAIR ID: AT3G47820

Short description: PLANT U-BOX 39

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G425965   GRMZM2G100090  

Wheat:

TAAFFX.1219.1.S1_AT  


GO biological process


protein ubiquitination


GO cellular component


cytoplasm, nucleus


GO molecular function


ubiquitin-protein transferase activity


Protein domain


PfamPF00514, Armadillo/beta-catenin-like repeat
PfamPF04564, U-box domain
SMARTSM00185, ARM
SMARTSM00504, Ubox

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT2G38250, AT4G18770, AT4G36990

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.832.28E-02
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.706.36E-11
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.673.85E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.691.53E-09






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