Gene: AT3G47120
     


Gene description


TAIR ID: AT3G47120

Short description: RNA recognition motif (RRM)-containing protein

Pathogen responsiveness: -3.05

General responsiveness: -2.25

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G123876  

Wheat: No orthologous gene

GO biological process


mRNA export from nucleus, mRNA splicing, via spliceosome


GO cellular component


precatalytic spliceosome, U2 snRNP, catalytic step 2 spliceosome, nuclear speck, RES complex


GO molecular function


DNA binding, metal ion binding, first spliceosomal transesterification activity, RNA binding, protein binding


Protein domain


PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PfamPF00642, Zinc finger C-x8-C-x5-C-x3-H type (and similar)
SMARTSM00360, RRM
SMARTSM00356, ZnF_C3H1

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.