GO Enrichment Analysis of Co-expressed Genes with
AT3G47120
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070482: response to oxygen levels | 0.00E+00 |
| 2 | GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase | 0.00E+00 |
| 3 | GO:0017126: nucleologenesis | 0.00E+00 |
| 4 | GO:0010111: glyoxysome organization | 0.00E+00 |
| 5 | GO:0030198: extracellular matrix organization | 1.30E-05 |
| 6 | GO:0019395: fatty acid oxidation | 3.42E-05 |
| 7 | GO:0006574: valine catabolic process | 2.10E-04 |
| 8 | GO:0009423: chorismate biosynthetic process | 2.53E-04 |
| 9 | GO:0006401: RNA catabolic process | 2.99E-04 |
| 10 | GO:0030091: protein repair | 3.46E-04 |
| 11 | GO:0006098: pentose-phosphate shunt | 4.45E-04 |
| 12 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 4.45E-04 |
| 13 | GO:0006896: Golgi to vacuole transport | 5.49E-04 |
| 14 | GO:0009073: aromatic amino acid family biosynthetic process | 6.03E-04 |
| 15 | GO:0045037: protein import into chloroplast stroma | 6.58E-04 |
| 16 | GO:0000266: mitochondrial fission | 6.58E-04 |
| 17 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 6.66E-04 |
| 18 | GO:0010102: lateral root morphogenesis | 7.14E-04 |
| 19 | GO:0055046: microgametogenesis | 7.14E-04 |
| 20 | GO:0034976: response to endoplasmic reticulum stress | 8.91E-04 |
| 21 | GO:0009695: jasmonic acid biosynthetic process | 1.01E-03 |
| 22 | GO:0051302: regulation of cell division | 1.01E-03 |
| 23 | GO:0031408: oxylipin biosynthetic process | 1.08E-03 |
| 24 | GO:0009561: megagametogenesis | 1.27E-03 |
| 25 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.34E-03 |
| 26 | GO:0006635: fatty acid beta-oxidation | 1.70E-03 |
| 27 | GO:0009816: defense response to bacterium, incompatible interaction | 2.26E-03 |
| 28 | GO:0048767: root hair elongation | 2.69E-03 |
| 29 | GO:0009631: cold acclimation | 2.87E-03 |
| 30 | GO:0034599: cellular response to oxidative stress | 3.15E-03 |
| 31 | GO:0006631: fatty acid metabolic process | 3.43E-03 |
| 32 | GO:0000209: protein polyubiquitination | 3.73E-03 |
| 33 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 4.13E-03 |
| 34 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.55E-03 |
| 35 | GO:0051726: regulation of cell cycle | 5.89E-03 |
| 36 | GO:0009790: embryo development | 7.35E-03 |
| 37 | GO:0007623: circadian rhythm | 8.26E-03 |
| 38 | GO:0055114: oxidation-reduction process | 1.48E-02 |
| 39 | GO:0045454: cell redox homeostasis | 1.48E-02 |
| 40 | GO:0016042: lipid catabolic process | 1.69E-02 |
| 41 | GO:0006397: mRNA processing | 1.77E-02 |
| 42 | GO:0009734: auxin-activated signaling pathway | 2.20E-02 |
| 43 | GO:0009611: response to wounding | 2.63E-02 |
| 44 | GO:0006457: protein folding | 3.11E-02 |
| 45 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.22E-02 |
| 46 | GO:0006979: response to oxidative stress | 4.31E-02 |
| 47 | GO:0030154: cell differentiation | 4.55E-02 |
| 48 | GO:0009733: response to auxin | 4.65E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008901: ferredoxin hydrogenase activity | 0.00E+00 |
| 2 | GO:0070191: methionine-R-sulfoxide reductase activity | 0.00E+00 |
| 3 | GO:0005201: extracellular matrix structural constituent | 0.00E+00 |
| 4 | GO:0003856: 3-dehydroquinate synthase activity | 0.00E+00 |
| 5 | GO:0003988: acetyl-CoA C-acyltransferase activity | 3.42E-05 |
| 6 | GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity | 6.16E-05 |
| 7 | GO:0004180: carboxypeptidase activity | 6.16E-05 |
| 8 | GO:0003995: acyl-CoA dehydrogenase activity | 1.30E-04 |
| 9 | GO:0005546: phosphatidylinositol-4,5-bisphosphate binding | 1.68E-04 |
| 10 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 2.53E-04 |
| 11 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.53E-04 |
| 12 | GO:0003730: mRNA 3'-UTR binding | 2.53E-04 |
| 13 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 2.53E-04 |
| 14 | GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity | 3.94E-04 |
| 15 | GO:0004630: phospholipase D activity | 3.94E-04 |
| 16 | GO:0050660: flavin adenine dinucleotide binding | 1.04E-03 |
| 17 | GO:0003756: protein disulfide isomerase activity | 1.27E-03 |
| 18 | GO:0001085: RNA polymerase II transcription factor binding | 1.48E-03 |
| 19 | GO:0016853: isomerase activity | 1.56E-03 |
| 20 | GO:0004518: nuclease activity | 1.78E-03 |
| 21 | GO:0008236: serine-type peptidase activity | 2.52E-03 |
| 22 | GO:0000166: nucleotide binding | 2.82E-03 |
| 23 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.87E-03 |
| 24 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.33E-03 |
| 25 | GO:0051287: NAD binding | 4.13E-03 |
| 26 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 7.23E-03 |
| 27 | GO:0016491: oxidoreductase activity | 7.47E-03 |
| 28 | GO:0008565: protein transporter activity | 7.48E-03 |
| 29 | GO:0003729: mRNA binding | 8.44E-03 |
| 30 | GO:0008017: microtubule binding | 8.53E-03 |
| 31 | GO:0003682: chromatin binding | 1.17E-02 |
| 32 | GO:0061630: ubiquitin protein ligase activity | 1.35E-02 |
| 33 | GO:0003924: GTPase activity | 1.72E-02 |
| 34 | GO:0009055: electron carrier activity | 1.81E-02 |
| 35 | GO:0046872: metal ion binding | 1.93E-02 |
| 36 | GO:0008289: lipid binding | 2.18E-02 |
| 37 | GO:0005507: copper ion binding | 3.33E-02 |
| 38 | GO:0005525: GTP binding | 3.70E-02 |
| 39 | GO:0044212: transcription regulatory region DNA binding | 4.29E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031595: nuclear proteasome complex | 2.99E-04 |
| 2 | GO:0009514: glyoxysome | 3.94E-04 |
| 3 | GO:0008541: proteasome regulatory particle, lid subcomplex | 6.03E-04 |
| 4 | GO:0030136: clathrin-coated vesicle | 1.34E-03 |
| 5 | GO:0005788: endoplasmic reticulum lumen | 2.26E-03 |
| 6 | GO:0005667: transcription factor complex | 2.35E-03 |
| 7 | GO:0005777: peroxisome | 3.24E-03 |
| 8 | GO:0005774: vacuolar membrane | 3.37E-03 |
| 9 | GO:0031902: late endosome membrane | 3.43E-03 |
| 10 | GO:0000502: proteasome complex | 4.44E-03 |
| 11 | GO:0009706: chloroplast inner membrane | 5.66E-03 |
| 12 | GO:0005623: cell | 6.73E-03 |
| 13 | GO:0009524: phragmoplast | 6.85E-03 |
| 14 | GO:0000139: Golgi membrane | 7.68E-03 |
| 15 | GO:0005759: mitochondrial matrix | 7.74E-03 |
| 16 | GO:0005783: endoplasmic reticulum | 8.22E-03 |
| 17 | GO:0046658: anchored component of plasma membrane | 1.01E-02 |
| 18 | GO:0016020: membrane | 1.01E-02 |
| 19 | GO:0005874: microtubule | 1.27E-02 |
| 20 | GO:0005737: cytoplasm | 1.84E-02 |
| 21 | GO:0009506: plasmodesma | 1.85E-02 |
| 22 | GO:0005794: Golgi apparatus | 2.71E-02 |
| 23 | GO:0031225: anchored component of membrane | 3.56E-02 |
| 24 | GO:0005802: trans-Golgi network | 3.63E-02 |
| 25 | GO:0005622: intracellular | 3.90E-02 |
| 26 | GO:0005768: endosome | 3.97E-02 |