gene detail

Gene description

TAIR ID: AT3G46900

Short description: copper transporter 2

Pathogen responsiveness: -1.21

General responsiveness: 0.05

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

copper ion transport, copper ion transmembrane transport, high-affinity copper ion transport

GO cellular component

anchored component of plasma membrane, integral component of membrane

GO molecular function

copper ion transmembrane transporter activity, high-affinity copper ion transmembrane transporter activity

Protein domain

Pfam	PF04145, Ctr copper transporter family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G18830

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 12 (Top20%)

Coexpression network

GSE56094_WT_HRPA- view
GSE56094_WT_PSTDC3000 view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	2.51	7.95E-08
GSE17464	Laer, control	Laer, PstDC3000 12 h	2.26	1.13E-06
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	2.74	7.45E-09
GSE2538	Col, WT, control	Col, WT, purified chitin octamer 30 min	-1.56	1.98E-04
GSE37921	Col, WT, control	Col, WT, CMV	1.60	5.20E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-1.53	3.95E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	-1.57	7.27E-03
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.52	4.67E-03