co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G46900

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009098: leucine biosynthetic process	7.89E-07
2	GO:0033506: glucosinolate biosynthetic process from homomethionine	4.26E-06
3	GO:0019761: glucosinolate biosynthetic process	1.10E-05
4	GO:2000030: regulation of response to red or far red light	1.18E-05
5	GO:0035434: copper ion transmembrane transport	6.40E-05
6	GO:0000373: Group II intron splicing	1.83E-04
7	GO:0009725: response to hormone	3.02E-04
8	GO:0006825: copper ion transport	4.35E-04
9	GO:0006606: protein import into nucleus	6.08E-04
10	GO:0015995: chlorophyll biosynthetic process	1.03E-03
11	GO:0018298: protein-chromophore linkage	1.10E-03
12	GO:0009407: toxin catabolic process	1.17E-03
13	GO:0009744: response to sucrose	1.51E-03
14	GO:0009644: response to high light intensity	1.59E-03
15	GO:0009636: response to toxic substance	1.63E-03
16	GO:0040008: regulation of growth	3.25E-03
17	GO:0007623: circadian rhythm	3.36E-03
18	GO:0009658: chloroplast organization	4.52E-03
19	GO:0080167: response to karrikin	5.24E-03
20	GO:0015979: photosynthesis	5.74E-03
21	GO:0055114: oxidation-reduction process	9.36E-03
22	GO:0009735: response to cytokinin	9.61E-03
23	GO:0055085: transmembrane transport	1.21E-02
24	GO:0006979: response to oxidative stress	1.70E-02
25	GO:0006810: transport	2.22E-02
26	GO:0046686: response to cadmium ion	2.31E-02
27	GO:0009651: response to salt stress	4.00E-02

Rank	GO Term	Adjusted P value
1	GO:0080105: 6-methylthiopropyl glucosinolate S-oxygenase activity	4.26E-06
2	GO:0003862: 3-isopropylmalate dehydrogenase activity	1.18E-05
3	GO:0080102: 3-methylthiopropyl glucosinolate S-oxygenase activity	1.18E-05
4	GO:0080104: 5-methylthiopropyl glucosinolate S-oxygenase activity	1.18E-05
5	GO:0080106: 7-methylthiopropyl glucosinolate S-oxygenase activity	1.18E-05
6	GO:0010277: chlorophyllide a oxygenase [overall] activity	2.19E-05
7	GO:0003861: 3-isopropylmalate dehydratase activity	2.19E-05
8	GO:0080103: 4-methylthiopropyl glucosinolate S-oxygenase activity	2.19E-05
9	GO:0080107: 8-methylthiopropyl glucosinolate S-oxygenase activity	3.41E-05
10	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	4.83E-05
11	GO:0016836: hydro-lyase activity	4.83E-05
12	GO:0019899: enzyme binding	1.19E-04
13	GO:0005375: copper ion transmembrane transporter activity	1.60E-04
14	GO:0022891: substrate-specific transmembrane transporter activity	5.20E-04
15	GO:0004499: N,N-dimethylaniline monooxygenase activity	5.49E-04
16	GO:0004872: receptor activity	6.99E-04
17	GO:0016168: chlorophyll binding	9.59E-04
18	GO:0050661: NADP binding	1.39E-03
19	GO:0004364: glutathione transferase activity	1.47E-03
20	GO:0051537: 2 iron, 2 sulfur cluster binding	1.59E-03
21	GO:0051287: NAD binding	1.71E-03
22	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.75E-03
23	GO:0008565: protein transporter activity	3.05E-03
24	GO:0000287: magnesium ion binding	4.46E-03
25	GO:0050660: flavin adenine dinucleotide binding	4.99E-03
26	GO:0004497: monooxygenase activity	5.24E-03
27	GO:0005506: iron ion binding	1.67E-02
28	GO:0016491: oxidoreductase activity	2.05E-02

Rank	GO Term	Adjusted P value
1	GO:0009535: chloroplast thylakoid membrane	3.49E-04
2	GO:0042651: thylakoid membrane	4.35E-04
3	GO:0009523: photosystem II	6.99E-04
4	GO:0009507: chloroplast	1.45E-03
5	GO:0009536: plastid	1.85E-03
6	GO:0009706: chloroplast inner membrane	2.32E-03
7	GO:0009570: chloroplast stroma	9.75E-03
8	GO:0005622: intracellular	1.54E-02
9	GO:0048046: apoplast	4.24E-02