gene detail

Gene description

TAIR ID: AT3G44680

Short description: histone deacetylase 9

Pathogen responsiveness: -2.67

General responsiveness: -1.42

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G119703

Wheat: No orthologous gene

GO biological process

histone H3-K9 deacetylation, negative regulation of seed germination, histone deacetylation, transcription, DNA-templated, regulation of transcription, regulation of leaf senescence

GO cellular component

nucleus, cytoplasm

GO molecular function

histone deacetylase activity, NAD-dependent histone deacetylase activity (H3-K14 specific), protein binding

Protein domain

Pfam	PF00850, Histone deacetylase domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G16110, AT3G14230, AT5G11260, AT2G47190

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 5

click to view PPI network

Coexpression network

GSE56094_WT_HRPA- view
GSE45212_MED14_PSTDC3000_AVRRPT2 view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.80	2.17E-02