Gene: AT3G28220
     

Gene description


TAIR ID: AT3G28220

Short description: TRAF-like family protein

Pathogen responsiveness: 0.70

General responsiveness: 2.82

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


unkown


GO cellular component


vacuole, cytoplasm, chloroplast envelope, integral component of membrane


GO molecular function


unkown


Protein domain


PfamPF00917, MATH domain
SMARTSM00061, MATH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 111 (Top5%)

click to view PPI network

Differentially expressed condition


26 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.717.08E-04
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d-1.521.43E-02
GSE13739Col, eds, control 7 dCol, eds, G.orontii 7 d-1.844.49E-03
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.427.41E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-1.699.94E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-2.128.02E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-2.525.51E-06
GSE37255Ws-4, pskr1-5, controlWs-4, pskr1-5, Hyaloperonospora arabidopsidis strain Emwa1 3 d1.961.20E-02
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.861.13E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.871.91E-06
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-4.702.32E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.882.45E-09
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.711.53E-07
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.102.81E-06
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h-2.101.76E-02
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-3.263.10E-03
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-3.501.49E-02
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h4.781.49E-04
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.723.87E-02
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h-2.287.09E-03
GSE56094Col, WT, control 3 hCol, WT, hrpA- 3 h-2.012.33E-02
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h-1.813.77E-02
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-2.255.60E-03
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-2.482.42E-03
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-3.027.60E-04
GSE73351Ws-4, ugt76b1, controlWs-4, ugt76b1, H.ara Emwa1 3 d2.484.37E-03






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