gene detail

Gene description

TAIR ID: AT3G27810

Short description: myb domain protein 21

Pathogen responsiveness: -0.97

General responsiveness: -4.80

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G143328

Wheat: No orthologous gene

GO biological process

regulation of transcription from RNA polymerase II promoter, stamen development, gibberellic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, regulation of transcription, DNA-templated, response to jasmonic acid, cell differentiation, stamen filament development, red, far-red light phototransduction, transcription

GO cellular component

nucleus

GO molecular function

RNA polymerase II transcription factor activity, sequence-specific DNA binding, transcription factor activity, RNA polymerase II transcription factor recruiting, transcription regulatory region DNA binding, DNA binding

Protein domain

Pfam	PF00249, Myb-like DNA-binding domain
SMART	SM00717, SANT

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G16857, AT4G16110, AT1G24260

Target:
AT3G06490, AT3G22370

Protein-protein interaction network

The number of partners (degree) is: 11 (Top20%)

click to view PPI network

Coexpression network

GSE56094_WT_PSTDC3000 view
GSE45212_MED14_PSTDC3000_AVRRPT2 view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	-4.27	6.01E-06
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-3.18	5.33E-04
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	1.68	2.17E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.69	3.13E-05
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	2.04	4.97E-17
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.59	3.78E-12
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	1.65	4.33E-13