gene detail

Gene description

TAIR ID: AT3G27010

Short description: TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20

Pathogen responsiveness: -1.44

General responsiveness: -3.32

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G034638 GRMZM2G092214

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, regulation of cell size, transcription, negative regulation of leaf senescence, anatomical structure morphogenesis

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF03634, TCP family transcription factor

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G13450, AT1G24260, AT5G61850

Target:
AT3G46040, AT1G23290, AT5G15630, AT3G53020, AT1G09610, AT4G37490, AT1G71930, AT2G29570

Protein-protein interaction network

The number of partners (degree) is: 27 (Top10%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Flg22 1 h	1.54	6.46E-06
GSE17464	Penta, control	Penta, Flg22 2 h	1.75	4.93E-07
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.65	6.16E-09
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.52	2.01E-08
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.52	1.16E-08