gene detail

Gene description

TAIR ID: AT3G26910

Short description: hydroxyproline-rich glycoprotein family protein

Pathogen responsiveness: 0.57

General responsiveness: -0.17

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

nucleus

GO molecular function

molecular_function

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G14230, AT4G31800

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

27 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 30 min	2.60	2.39E-02
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	2.85	1.77E-02
GSE17464	Laer, control	Laer, Flg22 1 h	3.07	1.09E-06
GSE17464	Laer, control	Laer, Flg22 2 h	2.05	6.94E-04
GSE17464	Penta, control	Penta, Flg22 2 h	3.35	1.95E-07
GSE17464	Penta, control	Penta, Flg22 2 h	2.70	1.81E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.51	8.52E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	1.62	6.89E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.65	2.46E-09
GSE2538	Col, WT, control	Col, WT, crab shell chitin 30 min	2.07	1.03E-05
GSE2538	Col, WT, control	Col, WT, purified chitin octamer 30 min	1.87	2.46E-05
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.53	1.33E-02
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	1.54	1.28E-03
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.74	4.83E-09
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	2.79	9.19E-12
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.82	5.81E-09
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.39	3.94E-11
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	2.39	1.44E-10
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	2.06	1.02E-02
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	4.00	7.36E-06
GSE5520	Col, WT, control 7 h	Col, WT, E.coli_TUV86 flic- 7 h	1.59	2.34E-02
GSE5615	Col, WT, water 1 h	Col, WT, Flg22 1 h	1.60	2.83E-05
GSE5615	Col, WT, water 1 h	Col, WT, HrpZ 1 h	1.77	6.27E-06
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	2.22	1.40E-08
GSE5616	Col, WT, water 6 h	Col, WT, P. infestans 6 h	2.27	6.79E-08
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.79	1.63E-02
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h	2.05	1.13E-03